RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PIGGQ5H8A4 983 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 CAMK1DQ8IU85 385 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 OR6P1Q8NGX9 317 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 TCF12Q99081 682 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 ZNF518BQ9C0D4 1074 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 RAD21L1Q9H4I0 556 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 PPP1R1BQ9UD71 204 aaPredicted RBP16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 CITO14578 2027 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 C10orf71Q711Q0 1435 aa16.13■□□□□ 0.17
PRPF40B-201ENST00000261897 DHRS12A0PJE2 317 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 HUS1O60921 280 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 SERPINB7O75635 380 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 CAPN15O75808 1086 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 PGAM1P18669 254 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 NOVP48745 357 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 ZNF143P52747 638 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 GRM3Q14832 879 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 ARHGAP17Q68EM7 881 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 Q6ZNX1 250 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 GPR180Q86V85 440 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 TP53INP2Q8IXH6 220 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 CLIP4Q8N3C7 705 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 CLEC4CQ8WTT0 213 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 TMEM176AQ96HP8 235 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 RBM38Q9H0Z9 239 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 HIPK3Q9H422 1215 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 PRDM12Q9H4Q4 367 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 CORINQ9Y5Q5 1042 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 MYH14Q7Z406 1995 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 PLIN4Q96Q06 1357 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 H3BMQ9 156 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 TAF4O00268 1085 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 ICAM1P05362 532 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 NFICP08651 508 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 ATP6V1B2P21281 511 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 TGFB2P61812 414 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 CMASQ8NFW8 434 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 NXNL1Q96CM4 212 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 ZDHHC15Q96MV8 337 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 COG8Q96MW5 612 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 EIF2AQ9BY44 585 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 EPB41L1Q9H4G0 881 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 OLAHQ9NV23 265 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 SLC38A7Q9NVC3 462 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 PRORSD1PA6NEY8 169 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 SNX2O60749 519 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 XYLBO75191 536 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 BCAS2O75934 225 aaPredicted RBP16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 MYO1DO94832 1006 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 CNTFP26441 200 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 FPGSQ05932 587 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 MADCAM1Q13477 382 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 TAS2R42Q7RTR8 314 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 ZNF280CQ8ND82 737 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 TUBGCP3Q96CW5 907 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 HPDLQ96IR7 371 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 FBXL18Q96ME1 805 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 ZBED2Q9BTP6 218 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 DHX33Q9H6R0 707 aaKnown RBP16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 MID2Q9UJV3 735 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 ACOT9Q9Y305 439 aa16.12■□□□□ 0.17
PRPF40B-201ENST00000261897 RGL2O15211 777 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 PMPCBO75439 489 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 DDHD2O94830 711 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 YWHAHQ04917 246 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 PDK2Q15119 407 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 FRMD8P1Q9BZ68 369 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 SIAEQ9HAT2 523 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 VPS45Q9NRW7 570 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 POU2F3Q9UKI9 436 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 RAD54BQ9Y620 910 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 GLI3P10071 1580 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 TMEM221A6NGB7 291 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 ABRAXAS1Q6UWZ7 409 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 TNIP2Q8NFZ5 429 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 PPP1R13LQ8WUF5 828 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 GIN1Q9NXP7 522 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 H0Y858 1186 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 TSHRP16473 764 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 PSMB9P28065 219 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 CAP2P40123 477 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 CLCN3P51790 818 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 EEF1DP3Q658K8 133 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 DCBLD1Q8N8Z6 715 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 LRRC39Q96DD0 335 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 P2RY11Q96G91 374 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 ELOVL4Q9GZR5 314 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 PXMP2Q9NR77 195 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 PLK2Q9NYY3 685 aa16.11■□□□□ 0.17
PRPF40B-201ENST00000261897 RSL1D1O76021 490 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 JCHAINP01591 159 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 IL7RP16871 459 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 MERTKQ12866 999 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 KIZQ2M2Z5 673 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 RSBN1Q5VWQ0 802 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 FAM91A1Q658Y4 838 aa16.1■□□□□ 0.17
PRPF40B-201ENST00000261897 ACO2Q99798 780 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms