RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 NCAM2O15394 837 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 MED26O95402 600 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 NADKO95544 446 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-201ENST00000261646 CD4P01730 458 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 GRIA1P42261 906 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 PPM1FP49593 454 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-201ENST00000261646 ST13P50502 369 aaKnown RBP16.4■□□□□ 0.22
SREBF1-201ENST00000261646 PAGE2BQ5JRK9 111 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 ARMC4Q5T2S8 1044 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 ZNF276Q8N554 614 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 ZBTB8BQ8NAP8 495 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-201ENST00000261646 OR52B2Q96RD2 323 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 CATSPERBQ9H7T0 1116 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 J3QRK9 145 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 SYNCRIPO60506 623 aaKnown RBP16.4■□□□□ 0.22
SREBF1-201ENST00000261646 VTNP04004 478 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 GJB1P08034 283 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 CCT8P50990 548 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 PITRM1Q5JRX3 1037 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 IL23RQ5VWK5 629 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 POTEHQ6S545 545 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 SPESP1Q6UW49 350 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 FBXL8Q96CD0 374 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 TBCDQ9BTW9 1192 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 PKP3Q9Y446 797 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 NR2E3Q9Y5X4 410 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 TNPO2O14787 897 aaKnown RBP16.4■□□□□ 0.22
SREBF1-201ENST00000261646 CHRNGP07510 517 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 AKT1P31749 480 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 IREB2P48200 963 aaKnown RBP16.4■□□□□ 0.22
SREBF1-201ENST00000261646 RNF19BQ6ZMZ0 732 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 ZNF410Q86VK4 478 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 EDEM1Q92611 657 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 SLC10A4Q96EP9 437 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 ERAP1Q9NZ08 941 aa16.4■□□□□ 0.22
SREBF1-201ENST00000261646 RAD51BO15315 384 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 ZNF12P17014 697 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 PRDX6P30041 224 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 TAF6P49848 677 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 BNIP3Q12983 259 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 CERCAMQ5T4B2 595 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 SLC9A4Q6AI14 798 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 ARMCX6Q7L4S7 300 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 B3GNT5Q9BYG0 378 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 RIBC2Q9H4K1 309 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 XPNPEP1Q9NQW7 623 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 CRYL1Q9Y2S2 319 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 C9JVG2 144 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 FAM20BO75063 409 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 LBPP18428 481 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 TRAF3Q13114 568 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 ZNF846Q147U1 533 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 ATG14Q6ZNE5 492 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 EID3Q8N140 333 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 ZNF516Q92618 1163 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 VPS33AQ96AX1 596 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 APOL5Q9BWW9 433 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 CCNT2O60583 730 aaKnown RBP16.39■□□□□ 0.21
SREBF1-201ENST00000261646 TSPAN3O60637 253 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 HMBSP08397 361 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 NFKB1P19838 968 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 TKTL1P51854 596 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 CAPSQ13938 189 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 FBXO16Q8IX29 292 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-201ENST00000261646 MPP5Q8N3R9 675 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 CNTD1Q8N815 330 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 AFG1LQ8WV93 481 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 MFSD3Q96ES6 412 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 COQ7Q99807 217 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 ARMC7Q9H6L4 198 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 TUBA8Q9NY65 449 aaPredicted RBP16.39■□□□□ 0.21
SREBF1-201ENST00000261646 FAM8A1Q9UBU6 413 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 TPRKBQ9Y3C4 175 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 ASB3Q9Y575 518 aa16.39■□□□□ 0.21
SREBF1-201ENST00000261646 PDZK1P1A8MUH7 402 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 BOLA2-SMG1P6H3BVE0 249 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 RGL2O15211 777 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 METTL18O95568 372 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TFPTP0C1Z6 253 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TPSB2P20231 275 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 MAP3K7CLP57077 242 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 OGDHQ02218 1023 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TLR1Q15399 786 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TPSAB1Q15661 275 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 C11orf91Q3C1V1 193 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SH3PXD2AQ5TCZ1 1133 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SIAH1Q8IUQ4 282 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 AGBL3Q8NEM8 1001 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 OR2T34Q8NGX1 318 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 OR2T3Q8NH03 318 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SLC2A14Q8TDB8 520 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 ADI1Q9BV57 179 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 ZNF556Q9HAH1 456 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TJP2Q9UDY2 1190 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TRHDEQ9UKU6 1024 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TEX264Q9Y6I9 313 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 A0A088AWK7 358 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 PENKP01210 267 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms