RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 RWDD4Q6NW29 188 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 PDZD4Q76G19 769 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 LPCAT2Q7L5N7 544 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 BNIPLQ7Z465 357 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 AMIGO2Q86SJ2 522 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 OSTM1Q86WC4 334 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 PGAM4Q8N0Y7 254 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 DEFB106AQ8N104 65 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 LILRA2Q8N149 483 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 CPSF7Q8N684 471 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 EFCAB3Q8N7B9 438 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 TMEM102Q8N9M5 508 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ARRDC4Q8NCT1 418 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 CDKL2Q92772 493 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 FAM149B1Q96BN6 582 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 HSPBAP1Q96EW2 488 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 SENP8Q96LD8 212 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 LENG8Q96PV6 779 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 SLC2A13Q96QE2 648 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 MED10Q9BTT4 135 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 TRIM62Q9BVG3 475 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 OSBPL11Q9BXB4 747 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 COG4Q9H9E3 785 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 COPS7BQ9H9Q2 264 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 CNGB3Q9NQW8 809 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 TUBA8Q9NY65 449 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 IGSF9Q9P2J2 1179 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ST3GAL5Q9UNP4 418 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 C9IYK1 514 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 H3BNH8 94 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 BMP10O95393 424 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ALDOAP04075 364 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 PRKCGP05129 697 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 MLNP12872 115 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ZNF26P17031 533 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ME2P23368 584 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 TKTP29401 623 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 NUDT2P50583 147 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 MRPS22P82650 360 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 NIPAL4Q0D2K0 466 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 GK3PQ14409 553 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 RAB6CQ53S08 254 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 SYCP2LQ5T4T6 812 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 WSCD1Q658N2 575 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ATG14Q6ZNE5 492 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 ZNF534Q76KX8 674 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 MRPL10Q7Z7H8 261 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 SAPCD2Q86UD0 394 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 SERINC5Q86VE9 423 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 DSELQ8IZU8 1212 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 SNRNP27Q8WVK2 155 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 WNT8BQ93098 351 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 NTAN1Q96AB6 310 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 KCTD15Q96SI1 283 aaPredicted RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 NPY6RQ99463 290 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 PKP2Q99959 881 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 RAB6CQ9H0N0 254 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 GOLGA2P5Q9HBQ8 144 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 XPNPEP3Q9NQH7 507 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 EIF2B3Q9NR50 452 aaKnown RBP10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 MTMR10Q9NXD2 777 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 DSEQ9UL01 958 aa10.97□□□□□ -0.65
CHRNA1-201ENST00000261007 TPP1O14773 563 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 MAGEB3O15480 346 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 ZNF623O75123 536 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 ZMPSTE24O75844 475 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 TOP3BO95985 862 aaKnown RBP10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 F9P00740 461 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 PIK3R1P27986 724 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 ARRB2P32121 409 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 MAGEA10P43363 369 aaPredicted RBP10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 PSMD7P51665 324 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 THOP1P52888 689 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 SEMA5AQ13591 1074 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 PDK1Q15118 436 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 VWA5B1Q5TIE3 1220 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 NCBP2-AS2Q69YL0 99 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 CLEC20AQ6ZU45 233 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 CARM1Q86X55 608 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 CLEC4CQ8WTT0 213 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 PDCD6IPQ8WUM4 868 aaKnown RBP10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 SREK1Q8WXA9 508 aaKnown RBP10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 PGBD4Q96DM1 585 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 CDRT15Q96T59 188 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 PNPLA3Q9NST1 481 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 MYRFQ9Y2G1 1151 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 RNF11Q9Y3C5 154 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 USP3Q9Y6I4 520 aa10.96□□□□□ -0.65
CHRNA1-201ENST00000261007 A0A0A0MRY4 1105 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 TRIM64CA6NLI5 447 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 AIM2O14862 343 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 SEPT4O43236 478 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 CA12O43570 354 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 SUPT3HO75486 399 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 TRPA1O75762 1119 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 DGKIO75912 1065 aa10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 XRCC1P18887 633 aaPredicted RBP10.96□□□□□ -0.66
CHRNA1-201ENST00000261007 MGAT3Q09327 533 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms