RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 CHRNA4P43681 627 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 WNT3AP56704 352 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 MPP3Q13368 585 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 TBC1D30Q9Y2I9 924 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 MYLKQ15746 1914 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 GBF1Q92538 1859 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 ZCWPW2A0A1B0GU75 182 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 ERVK-10P10266 1014 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 ANKRD20A4Q4UJ75 823 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 TTC39BQ5VTQ0 682 aaPredicted RBP22.7■■□□□ 1.22
SIX3-201ENST00000260653 CXorf57Q6NSI4 855 aaKnown RBP22.7■■□□□ 1.22
SIX3-201ENST00000260653 SETD3Q86TU7 594 aaPredicted RBP22.7■■□□□ 1.22
SIX3-201ENST00000260653 CERS2Q96G23 380 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 SERAC1Q96JX3 654 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 NKIRAS1Q9NYS0 192 aa22.7■■□□□ 1.22
SIX3-201ENST00000260653 FAM237BA0A1B0GVD1 139 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 ILVBLA1L0T0 632 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 CCDC78A2IDD5 438 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 AP3B1O00203 1094 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 PRPF4O43172 522 aaKnown RBP eCLIP22.69■■□□□ 1.22
SIX3-201ENST00000260653 TYROBPO43914 113 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 TBL1XO60907 577 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 USP1O94782 785 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 EPCAMP16422 314 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 SLC7A9P82251 487 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 BMPR2Q13873 1038 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 ZNF235Q14590 738 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 POU6F1Q14863 301 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 RANBP10Q6VN20 620 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.69■■□□□ 1.22
SIX3-201ENST00000260653 GDAP1Q8TB36 358 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 ARRDC2Q8TBH0 407 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 BHMTQ93088 406 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 ZNF778Q96MU6 729 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 SLC46A2Q9BY10 475 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 FAM107BQ9H098 131 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 SMG9Q9H0W8 520 aaKnown RBP22.69■■□□□ 1.22
SIX3-201ENST00000260653 ATP13A1Q9HD20 1204 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 CFAP97Q9P2B7 532 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 SOX13Q9UN79 622 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 TRAV19A0A0A6YYK7 116 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 TRIM49D1C9J1S8 452 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 LPXNO60711 386 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 C1RP00736 705 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 MT-ND3P03897 115 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 MARK2Q7KZI7 788 aaKnown RBP22.69■■□□□ 1.22
SIX3-201ENST00000260653 TCEAL4Q96EI5 215 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 PSAT1Q9Y617 370 aa22.69■■□□□ 1.22
SIX3-201ENST00000260653 GMNCA6NCL1 334 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 CA4P22748 312 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 RPA3P35244 121 aaPredicted RBP22.68■■□□□ 1.22
SIX3-201ENST00000260653 OXCT1P55809 520 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 RNF219Q5W0B1 726 aaPredicted RBP22.68■■□□□ 1.22
SIX3-201ENST00000260653 TAX1BP1Q86VP1 789 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 RASSF3Q86WH2 238 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 DYDC1Q8WWB3 177 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 CDKL2Q92772 493 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 SMG5Q9UPR3 1016 aaKnown RBP22.68■■□□□ 1.22
SIX3-201ENST00000260653 SRRM3A6NNA2 597 aaPredicted RBP22.68■■□□□ 1.22
SIX3-201ENST00000260653 GFRA2O00451 464 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 KRT37O76014 449 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 NMBRP28336 390 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 FSCBQ5H9T9 825 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 CARNMT1Q8N4J0 409 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 SHKBP1Q8TBC3 707 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 ZNF599Q96NL3 588 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 POLR1EQ9GZS1 481 aaKnown RBP22.68■■□□□ 1.22
SIX3-201ENST00000260653 MUC3BQ9H195 1237 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 VPS45Q9NRW7 570 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 LSM7Q9UK45 103 aaKnown RBP22.68■■□□□ 1.22
SIX3-201ENST00000260653 FAM169AQ9Y6X4 670 aa22.68■■□□□ 1.22
SIX3-201ENST00000260653 MAGEB16A2A368 324 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 HMX2A2RU54 273 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 KDELR3O43731 214 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 SNRPAP09012 282 aaKnown RBP22.67■■□□□ 1.22
SIX3-201ENST00000260653 WDR4P57081 412 aaKnown RBP22.67■■□□□ 1.22
SIX3-201ENST00000260653 MGAT5Q09328 741 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 SLC25A41Q8N5S1 370 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 SEMA3CQ99985 751 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 ZFATQ9P243 1243 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 CBX4O00257 560 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 NDUFAB1O14561 156 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 GBP2P32456 591 aaPredicted RBP22.67■■□□□ 1.22
SIX3-201ENST00000260653 BBS7Q8IWZ6 715 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 FAM217AQ8IXS0 508 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 HJURPQ8NCD3 748 aaPredicted RBP22.67■■□□□ 1.22
SIX3-201ENST00000260653 DENND1AQ8TEH3 1009 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 TMA16Q96EY4 203 aaKnown RBP22.67■■□□□ 1.22
SIX3-201ENST00000260653 CCT8L2Q96SF2 557 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 KIFC1Q9BW19 673 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 ACE2Q9BYF1 805 aaPredicted RBP22.67■■□□□ 1.22
SIX3-201ENST00000260653 UBA2Q9UBT2 640 aaPredicted RBP22.67■■□□□ 1.22
SIX3-201ENST00000260653 SH3BP1Q9Y3L3 701 aa22.67■■□□□ 1.22
SIX3-201ENST00000260653 H0Y626 953 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 TRANK1O15050 2925 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 ZSCAN26Q16670 478 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 MROH9Q5TGP6 573 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 FOXR1Q6PIV2 292 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 BANPQ8N9N5 519 aa22.66■■□□□ 1.22
SIX3-201ENST00000260653 TADA1Q96BN2 335 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms