RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 MMGT1Q8N4V1 131 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 ZNF366Q8N895 744 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 ZNF513Q8N8E2 541 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 CCDC89Q8N998 374 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 FRS2Q8WU20 508 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 SHDQ96IW2 340 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 EXOC2Q96KP1 924 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 TM6SF2Q9BZW4 377 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 TNKS2Q9H2K2 1166 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 TMEM245Q9H330 911 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 FEZ2Q9UHY8 353 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 ATP8A1Q9Y2Q0 1164 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 MTF2Q9Y483 593 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 TTLL3Q9Y4R7 772 aa16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 MYO18AQ92614 2054 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-201ENST00000260054 TTC24A2A3L6 582 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 WASH3PC4AMC7 463 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 RAD51CO43502 376 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 GJB3O75712 270 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 NEBLO76041 1014 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 GAS8O95995 478 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 TARSP26639 723 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 IL12RB1P42701 662 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 RHOAP61586 193 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 DHX34Q14147 1143 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 C2orf27AQ580R0 203 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 METTL3Q86U44 580 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 JAMLQ86YT9 394 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 BBS5Q8N3I7 341 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 KDM1BQ8NB78 822 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 MGME1Q9BQP7 344 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 CEP44Q9C0F1 390 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 MTG2Q9H4K7 406 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 LTB4R2Q9NPC1 389 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 CACNA2D2Q9NY47 1150 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 TRHDEQ9UKU6 1024 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 KANSL1LA0AUZ9 987 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 OPHN1O60890 802 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 RNF40O75150 1001 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 KRT14P02533 472 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 CHRNB1P11230 501 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 HLA-EP13747 358 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 NFKB1P19838 968 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 PRKCHP24723 683 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 RPL22P35268 128 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 ENPP2Q13822 863 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 FBXO43Q4G163 708 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 ATXN7L2Q5T6C5 722 aaPredicted RBP16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 SERPINA13PQ6UXR4 307 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 Q6ZVU0 165 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 IL17RCQ8NAC3 791 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 CCDC26Q8TAB7 109 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 ISG20Q96AZ6 181 aaKnown RBP16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 TRIM51Q9BSJ1 452 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 LRRC1Q9BTT6 524 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 FOXQ1Q9C009 403 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 PCDH9Q9HC56 1237 aa16.05■□□□□ 0.16
CCDC90B-201ENST00000260054 NCOR1O75376 2440 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 F5H423 210 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 RIOK3O14730 519 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 METTL18O95568 372 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 CR2P20023 1033 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 HSPA9P38646 679 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 WASP42768 502 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 VPS41P49754 854 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 DSC2Q02487 901 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 NIPAL4Q0D2K0 466 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 FZD5Q13467 585 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 UBXN2BQ14CS0 331 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 PPP1R7Q15435 360 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 HNRNPA1L2Q32P51 320 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 ALG1LQ6GMV1 187 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 C8orf74Q6P047 294 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 ARHGEF18Q6ZSZ5 1173 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 CHPFQ8IZ52 775 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 TAB3Q8N5C8 712 aaPredicted RBP16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 PCDH20Q8N6Y1 951 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 PTPRN2Q92932 1015 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 GORASP1Q9BQQ3 440 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 POLR1EQ9GZS1 481 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 GBA3Q9H227 469 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 TBC1D17Q9HA65 648 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 GLOD4Q9HC38 313 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 MRPS17Q9Y2R5 130 aaKnown RBP16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 STON1Q9Y6Q2 735 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 ATG2BQ96BY7 2078 aa16.04■□□□□ 0.16
CCDC90B-201ENST00000260054 BNIP3LO60238 219 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 SLU7O95391 586 aaKnown RBP16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 PSMB4P28070 264 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 ACTN2P35609 894 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 ITKQ08881 620 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 NSUN2Q08J23 767 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 PTK6Q13882 451 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 IHHQ14623 411 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 MAATS1Q7Z4T9 603 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 OR2AP1Q8NGE2 309 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 OR2A12Q8NGT7 310 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 OR6K2Q8NGY2 324 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 ARRDC2Q8TBH0 407 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms