RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 OXR1Q8N573 874 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 TMEM145Q8NBT3 493 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 SELENOOQ9BVL4 669 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 HDAC8Q9BY41 377 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 CHD5Q8TDI0 1954 aa19.39■□□□□ 0.69
TM6SF1-201ENST00000258909 MAGEC1O60732 1142 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 LRIG2O94898 1065 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 PLEKP08567 350 aaPredicted RBP19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 CDK11BP21127 795 aaKnown RBP19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 CCNHP51946 323 aaPredicted RBP19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 SLC20A2Q08357 652 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 CCDC15Q0P6D6 951 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 OVGP1Q12889 678 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 STX1AQ16623 288 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 SFMBT2Q5VUG0 894 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 NEK5Q6P3R8 708 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 WDR59Q6PJI9 974 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 C19orf48Q6RUI8 117 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 STRADAQ7RTN6 431 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 KANSL1Q7Z3B3 1105 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 NLRP14Q86W24 1093 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 RYBPQ8N488 228 aaPredicted RBP19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 PCDH20Q8N6Y1 951 aaKnown RBP19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 ANKRD20A12PQ8NF67 263 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 OR6K2Q8NGY2 324 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 CENPIQ92674 756 aaPredicted RBP19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 PPP1R16AQ96I34 528 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 HEPHQ9BQS7 1158 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 CEP44Q9C0F1 390 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 OSBPL2Q9H1P3 480 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 ZDHHC6Q9H6R6 413 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 CACNA1GO43497 2377 aa19.38■□□□□ 0.69
TM6SF1-201ENST00000258909 RHOQP17081 205 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 GPD1P21695 349 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 NRG1Q02297 640 aaPredicted RBP19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 CYP4F3Q08477 520 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 MAPK8IP2Q13387 824 aaPredicted RBP19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 CAMK2BQ13554 666 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 NCAPHQ15003 741 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 PYROXD2Q8N2H3 581 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 OR13H1Q8NG92 308 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 ARHGEF2Q92974 986 aaKnown RBP19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 CALN1Q9BXU9 219 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 HSD3B7Q9H2F3 369 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 TMEM248Q9NWD8 314 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 HECAQ9UBI9 543 aaPredicted RBP19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 LHX6Q9UPM6 363 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 NEU3Q9UQ49 428 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 RAXQ9Y2V3 346 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 DAAM1Q9Y4D1 1078 aa19.37■□□□□ 0.69
TM6SF1-201ENST00000258909 RFPL3O75679 317 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 ADRB3P13945 408 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 AKT2P31751 481 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 MAPKAPK2P49137 400 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 ACADVLP49748 655 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 NEK3P51956 506 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 FBXL19Q6PCT2 694 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 APTXQ7Z2E3 356 aaKnown RBP19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 PHF13Q86YI8 300 aaPredicted RBP19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 NETO2Q8NC67 525 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 TBC1D31Q96DN5 1066 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 AGPAT1Q99943 283 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 URB1O60287 2271 aaKnown RBP19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 ADAMTS20P59510 1910 aa19.36■□□□□ 0.69
TM6SF1-201ENST00000258909 CCP110O43303 1012 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 CALB1P05937 261 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 ATP1A3P13637 1013 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 HNRNPA2B1P22626 353 aaKnown RBP19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 ITGB7P26010 798 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 L1CAMP32004 1257 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 TMEM259Q4ZIN3 620 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 SCYL2Q6P3W7 929 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 GCNT7Q6ZNI0 430 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 MON1BQ7L1V2 547 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 PARS2Q7L3T8 475 aaKnown RBP19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 SLC25A45Q8N413 288 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 C3orf20Q8ND61 904 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 TSC1Q92574 1164 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 ERGIC2Q96RQ1 377 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 UCKL1Q9NWZ5 548 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 PCDHGA1Q9Y5H4 931 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 MYLKQ15746 1914 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 LRRC10BA6NIK2 292 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 SIGLEC16A6NMB1 481 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 TRIM38O00635 465 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 RAMP2O60895 175 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 PAK4O96013 591 aaPredicted RBP19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 JUPP14923 745 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 ETFBP38117 255 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 RPL7AP62424 266 aaKnown RBP19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 FGL2Q14314 439 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 ZNF542PQ5EBM4 170 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 SLFN11Q7Z7L1 901 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 TMPRSS12Q86WS5 348 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 ZNF354CQ86Y25 554 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 AOPEPQ8N6M6 819 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 SLC17A9Q9BYT1 436 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 MAGEH1Q9H213 219 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 GPSM3Q9Y4H4 160 aa19.35■□□□□ 0.69
TM6SF1-201ENST00000258909 FADS3Q9Y5Q0 445 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms