RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 RABGAP1LQ5R372 815 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 DENND5AQ6IQ26 1287 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP28.1■■■□□ 2.09
CCM2-201ENST00000258781 ACMSDQ8TDX5 336 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 IMP4Q96G21 291 aaKnown RBP28.1■■■□□ 2.09
CCM2-201ENST00000258781 SRPK1Q96SB4 655 aaKnown RBP28.1■■■□□ 2.09
CCM2-201ENST00000258781 IQCGQ9H095 443 aaKnown RBP28.1■■■□□ 2.09
CCM2-201ENST00000258781 OBSL1O75147 1896 aa28.1■■■□□ 2.09
CCM2-201ENST00000258781 STC2O76061 302 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 ADH1AP07327 375 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 TPH1P17752 444 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 GP5P40197 560 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 PCID2Q5JVF3 399 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 LILRA6Q6PI73 481 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 PTCD2Q8WV60 388 aaKnown RBP28.09■■■□□ 2.09
CCM2-201ENST00000258781 MRGPRX2Q96LB1 330 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 FSD1LQ9BXM9 530 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 CERS4Q9HA82 394 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 VPS45Q9NRW7 570 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 TXNDC16Q9P2K2 825 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 USP15Q9Y4E8 981 aaPredicted RBP28.09■■■□□ 2.09
CCM2-201ENST00000258781 MYLKQ15746 1914 aa28.09■■■□□ 2.09
CCM2-201ENST00000258781 ERVK-21P61565 698 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 SLC10A7Q0GE19 358 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 GRTP1Q5TC63 336 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 POTEHQ6S545 545 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 KDELC1Q6UW63 502 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 DNAJB7Q7Z6W7 309 aaPredicted RBP28.08■■■□□ 2.09
CCM2-201ENST00000258781 ZNF354CQ86Y25 554 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 PABPC5Q96DU9 382 aaKnown RBP28.08■■■□□ 2.09
CCM2-201ENST00000258781 PITPNM3Q9BZ71 974 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 NT5MQ9NPB1 228 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 CHRAC1Q9NRG0 131 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 SLC17A6Q9P2U8 582 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 CDH4P55283 916 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 RANBP10Q6VN20 620 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 SPATA21Q7Z572 469 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 MFSD3Q96ES6 412 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 KLF16Q9BXK1 252 aaPredicted RBP28.08■■■□□ 2.09
CCM2-201ENST00000258781 MRM3Q9HC36 420 aaKnown RBP28.08■■■□□ 2.09
CCM2-201ENST00000258781 PSAT1Q9Y617 370 aa28.08■■■□□ 2.09
CCM2-201ENST00000258781 PRAMEF11O60813 436 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 PMPCBO75439 489 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 RFWD3Q6PCD5 774 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 ITIH5Q86UX2 942 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 DENND1CQ8IV53 801 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 ZNF75CPQ92670 426 aaPredicted RBP28.07■■■□□ 2.08
CCM2-201ENST00000258781 ZNF599Q96NL3 588 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 FAM111AQ96PZ2 611 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 EMILIN2Q9BXX0 1053 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 MAGEH1Q9H213 219 aa28.07■■■□□ 2.08
CCM2-201ENST00000258781 PDE4DIPQ5VU43 2346 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 CORO1AP31146 461 aaKnown RBP28.06■■■□□ 2.08
CCM2-201ENST00000258781 CRHR1P34998 444 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 WNT3AP56704 352 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 PKN3Q6P5Z2 889 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 PPHLN1Q8NEY8 458 aaKnown RBP28.06■■■□□ 2.08
CCM2-201ENST00000258781 MICAL1Q8TDZ2 1067 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 ARNT2Q9HBZ2 717 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 PLLPQ9Y342 182 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 STARD13Q9Y3M8 1113 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 ITGA2BP08514 1039 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 TEDDM1Q5T9Z0 273 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 TMCO4Q5TGY1 634 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 KCNMB4Q86W47 210 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 CFAP52Q8N1V2 620 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 PLCD4Q9BRC7 762 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 RNF38Q9H0F5 515 aa28.06■■■□□ 2.08
CCM2-201ENST00000258781 C12orf65Q9H3J6 166 aaKnown RBP28.06■■■□□ 2.08
CCM2-201ENST00000258781 ZFP37Q9Y6Q3 630 aaPredicted RBP28.06■■■□□ 2.08
CCM2-201ENST00000258781 DOCK6Q96HP0 2047 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 MYO9BQ13459 2157 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 C2orf78A6NCI8 922 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 KLKB1P03952 638 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 NMBRP28336 390 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 ACVRL1P37023 503 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 CORO7P57737 925 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 PDPK2PQ6A1A2 396 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 CGB2Q6NT52 195 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 CDHR3Q6ZTQ4 885 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 NDUFAF2Q8N183 169 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 SAMD11Q96NU1 681 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 DDX50Q9BQ39 737 aaKnown RBP28.05■■■□□ 2.08
CCM2-201ENST00000258781 NKX2-4Q9H2Z4 354 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 ATP13A1Q9HD20 1204 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 C20orf96Q9NUD7 363 aaPredicted RBP28.05■■■□□ 2.08
CCM2-201ENST00000258781 PCMTD2Q9NV79 361 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 NSMCE4AQ9NXX6 385 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 IL1RAPL1Q9NZN1 696 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 REV3LO60673 3130 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 SZT2Q5T011 3432 aa28.05■■■□□ 2.08
CCM2-201ENST00000258781 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.04■■■□□ 2.08
CCM2-201ENST00000258781 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.04■■■□□ 2.08
CCM2-201ENST00000258781 H3BNC9 293 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 EDF1O60869 148 aaKnown RBP28.04■■■□□ 2.08
CCM2-201ENST00000258781 CLDN11O75508 207 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 GPM6BQ13491 265 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 LBRQ14739 615 aaKnown RBP28.04■■■□□ 2.08
CCM2-201ENST00000258781 CCDC121Q6ZUS5 278 aa28.04■■■□□ 2.08
CCM2-201ENST00000258781 FAM47EQ6ZV65 393 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms