RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TMEM25Q86YD3 366 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 CCDC117Q8IWD4 279 aaPredicted RBP9.61□□□□□ -0.87
NIP7-202ENST00000254941 ADGRG2Q8IZP9 1017 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.61□□□□□ -0.87
NIP7-202ENST00000254941 DCAF4L2Q8NA75 395 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 FGF13Q92913 245 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 IRF7Q92985 503 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 TADA1Q96BN2 335 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 ASB16Q96NS5 453 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 LRRC3BQ96PB8 259 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 EBNA1BP2Q99848 306 aaKnown RBP9.61□□□□□ -0.87
NIP7-202ENST00000254941 POLR1EQ9GZS1 481 aaKnown RBP9.61□□□□□ -0.87
NIP7-202ENST00000254941 LINC00597Q9H2U6 94 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 VPS37BQ9H9H4 285 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 TMBIM4Q9HC24 238 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 SPHK2Q9NRA0 654 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 VPS45Q9NRW7 570 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 HAUS2Q9NVX0 235 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 PLK2Q9NYY3 685 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 GDE1Q9NZC3 331 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 KIAA1522Q9P206 1035 aaPredicted RBP9.61□□□□□ -0.87
NIP7-202ENST00000254941 UBA2Q9UBT2 640 aaPredicted RBP9.61□□□□□ -0.87
NIP7-202ENST00000254941 SEPT3Q9UH03 358 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 VPS28Q9UK41 221 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 CLEC4EQ9ULY5 219 aa9.61□□□□□ -0.87
NIP7-202ENST00000254941 GOLGA8KD6RF30 607 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 RASGRF2O14827 1237 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 MUSKO15146 869 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 RNF40O75150 1001 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 CPP00450 1065 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 MMP2P08253 660 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 GSTA2P09210 222 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 OAS2P29728 719 aaKnown RBP9.6□□□□□ -0.87
NIP7-202ENST00000254941 ADRA1AP35348 466 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 CSKP41240 450 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 NIPAL4Q0D2K0 466 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 CDH17Q12864 832 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 SLC12A1Q13621 1099 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 ZNF235Q14590 738 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 INO80DQ53TQ3 878 aaPredicted RBP9.6□□□□□ -0.87
NIP7-202ENST00000254941 FAM78AQ5JUQ0 283 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 RANBP10Q6VN20 620 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 LEKR1Q6ZMV7 388 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 CCNJLQ8IV13 435 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 BBS5Q8N3I7 341 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 MPP5Q8N3R9 675 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 OR52K1Q8NGK4 314 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 ARRDC2Q8TBH0 407 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 SMARCD2Q92925 531 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 ACDQ96AP0 544 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 ARL8AQ96BM9 186 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 MGME1Q9BQP7 344 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 CCDC77Q9BR77 488 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 NAT9Q9BTE0 207 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 C2orf49Q9BVC5 232 aaPredicted RBP9.6□□□□□ -0.87
NIP7-202ENST00000254941 APOL5Q9BWW9 433 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 PIH1D1Q9NWS0 290 aaKnown RBP9.6□□□□□ -0.87
NIP7-202ENST00000254941 ZC3H7BQ9UGR2 993 aaKnown RBP9.6□□□□□ -0.87
NIP7-202ENST00000254941 RABGEF1Q9UJ41 708 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 CDH22Q9UJ99 828 aa9.6□□□□□ -0.87
NIP7-202ENST00000254941 CXorf51AA0A1B0GTR3 108 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 TCRBV9S1A1TA0A576 114 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 SNAP91O60641 907 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 PMPCBO75439 489 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 CD160O95971 181 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 IVLP07476 585 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 MGAT1P26572 445 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 CD86P42081 329 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 NPY2RP49146 381 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 PLK1P53350 603 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 SESN2P58004 480 aaPredicted RBP9.59□□□□□ -0.87
NIP7-202ENST00000254941 DSC2Q02487 901 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 ITKQ08881 620 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 LMAN2Q12907 356 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 IHHQ14623 411 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 LONRF1Q17RB8 773 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 LRIT3Q3SXY7 679 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 TTMPQ5BVD1 217 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 KDELC1Q6UW63 502 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 CAPN12Q6ZSI9 719 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 APCDD1Q8J025 514 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 ZNF557Q8N988 423 aaPredicted RBP9.59□□□□□ -0.87
NIP7-202ENST00000254941 DNAAF3Q8N9W5 541 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 IPMKQ8NFU5 416 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 EPS8L3Q8TE67 593 aaKnown RBP9.59□□□□□ -0.87
NIP7-202ENST00000254941 RSPRY1Q96DX4 576 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 STAMBPL1Q96FJ0 436 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 PGM2Q96G03 612 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 LMLNQ96KR4 655 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 MRGPRX2Q96LB1 330 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 TBL1YQ9BQ87 522 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 CINPQ9BW66 212 aaPredicted RBP9.59□□□□□ -0.87
NIP7-202ENST00000254941 BBS2Q9BXC9 721 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 FSD1LQ9BXM9 530 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 IL22Q9GZX6 179 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 ACSS3Q9H6R3 686 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 PPCSQ9HAB8 311 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 TRPV4Q9HBA0 871 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 PLAC1Q9HBJ0 212 aa9.59□□□□□ -0.87
NIP7-202ENST00000254941 ARNT2Q9HBZ2 717 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms