RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 EBF4Q9BQW3 602 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 MLPHQ9BV36 600 aaPredicted RBP15.93■□□□□ 0.14
RFX1-201ENST00000254325 CINPQ9BW66 212 aaPredicted RBP15.93■□□□□ 0.14
RFX1-201ENST00000254325 SIRPGQ9P1W8 387 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 ITM2AO43736 263 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 GMPRP36959 345 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 CHRNA4P43681 627 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 RPL34P49207 117 aaKnown RBP15.93■□□□□ 0.14
RFX1-201ENST00000254325 MYCBPQ99417 103 aaPredicted RBP15.93■□□□□ 0.14
RFX1-201ENST00000254325 OMDQ99983 421 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 TRPC7Q9HCX4 862 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 NVLO15381 856 aaKnown RBP15.93■□□□□ 0.14
RFX1-201ENST00000254325 CRABP2P29373 138 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 ACCSLQ4AC99 568 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 TEDDM1Q5T9Z0 273 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 DENND6AQ8IWF6 608 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 ZIC5Q96T25 663 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 OR6C75A6NL08 312 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 TLR5O60602 858 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 SMIM24O75264 130 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 HTR7P34969 479 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 IRF9Q00978 393 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 SWT1Q5T5J6 900 aaKnown RBP15.93■□□□□ 0.14
RFX1-201ENST00000254325 VWA5B1Q5TIE3 1220 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 OTUD1Q5VV17 481 aaPredicted RBP15.93■□□□□ 0.14
RFX1-201ENST00000254325 RINLQ6ZS11 566 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 LRRC8DQ7L1W4 858 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 DBF4BQ8NFT6 615 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 HS3ST4Q9Y661 456 aa15.93■□□□□ 0.14
RFX1-201ENST00000254325 DNAJC6O75061 913 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 HLA-DQB2P05538 268 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 RAB10P61026 200 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 PDAP1Q13442 181 aaKnown RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 KRT72Q14CN4 511 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 RAB41Q5JT25 222 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 FAM171BQ6P995 826 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 DNAJC9Q8WXX5 260 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 ARNTL2Q8WYA1 636 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 BHMTQ93088 406 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 PGAP3Q96FM1 320 aaPredicted RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 FCRL5Q96RD9 977 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 CADM1Q9BY67 442 aaKnown RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 NUF2Q9BZD4 464 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.92■□□□□ 0.142e-7■■■■□ 23.4
RFX1-201ENST00000254325 VCXQ9H320 206 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 DENND2DQ9H6A0 471 aaPredicted RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 EML4Q9HC35 981 aaKnown RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 SARS2Q9NP81 518 aaKnown RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 TMEM30AQ9NV96 361 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 NCKIPSDQ9NZQ3 722 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 XPR1Q9UBH6 696 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 DNAJB4Q9UDY4 337 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 TRIP12Q14669 1992 aaPredicted RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 PRRG1O14668 218 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 AOC2O75106 756 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 ATP5BP06576 529 aaKnown RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 GRIA4P48058 902 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 NIPAL4Q0D2K0 466 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 DBN1Q16643 649 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 CYS1Q717R9 158 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 CIR1Q86X95 450 aaPredicted RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 MAGEC3Q8TD91 643 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 HMCESQ96FZ2 354 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 BTN2A3PQ96KV6 586 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 SEMA3CQ99985 751 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 NMUR1Q9HB89 426 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 UXTQ9UBK9 157 aaPredicted RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 ARHGAP26Q9UNA1 814 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 PROCP04070 461 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 SERPINF2P08697 491 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 ENO3P13929 434 aaPredicted RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 RHOQP17081 205 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 PBX3P40426 434 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 SCNN1BP51168 640 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 PRKAA1Q13131 559 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 ZNF177Q13360 481 aaPredicted RBP15.92■□□□□ 0.14
RFX1-201ENST00000254325 SPDYAQ5MJ70 313 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 PM20D1Q6GTS8 502 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 FUBP3Q96I24 572 aaKnown RBP eCLIP15.92■□□□□ 0.14
RFX1-201ENST00000254325 BEGAINQ9BUH8 593 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 VCX3BQ9H321 246 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 RNF186Q9NXI6 227 aa15.92■□□□□ 0.14
RFX1-201ENST00000254325 SBF1O95248 1867 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 BNIP3LO60238 219 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 GFAPP14136 432 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 ALDH1A3P47895 512 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 PSEN1P49768 467 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 PLK1P53350 603 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 OXCT1P55809 520 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 NSUN2Q08J23 767 aaKnown RBP eCLIP15.91■□□□□ 0.14
RFX1-201ENST00000254325 LAMB3Q13751 1172 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 MRNIPQ6NTE8 343 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 C14orf80Q86SX3 495 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 CFAP52Q8N1V2 620 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 TAS2R1Q9NYW7 299 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 TCAF1Q9Y4C2 921 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 PABPN1LA6NDY0 278 aaKnown RBP15.91■□□□□ 0.14
RFX1-201ENST00000254325 TK2O00142 265 aa15.91■□□□□ 0.14
RFX1-201ENST00000254325 ALDH1A2O94788 518 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms