RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 C10orf120Q5SQS8 335 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 IGSF8Q969P0 613 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 CADM1Q9BY67 442 aaKnown RBP25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 DONSONQ9NYP3 566 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 LRFN2Q9ULH4 789 aa25.54■■□□□ 1.68
TMEM55B-201ENST00000250489 G3V2L1 256 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 J3KR12 359 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 VAPBO95292 243 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 IGLV3-27P01718 113 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 HARS2P49590 506 aaKnown RBP25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 RENBPP51606 427 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 WNT3AP56704 352 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 ABCE1P61221 599 aaKnown RBP25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 TCTN1Q2MV58 587 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 PREPLQ4J6C6 727 aaPredicted RBP25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 RTP2Q5QGT7 225 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 WLSQ5T9L3 541 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 RAP1GAP2Q684P5 730 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 FBXL22Q6P050 247 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 PPP4R1Q8TF05 950 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 ATXN3LQ9H3M9 355 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 TREX1Q9NSU2 369 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 SLC2A6Q9UGQ3 507 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 AHSGP02765 367 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 CHRNA4P43681 627 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 UGP2Q16851 508 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 RINLQ6ZS11 566 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 TREML1Q86YW5 311 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 SEPT8Q92599 483 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 IMP4Q96G21 291 aaKnown RBP25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 RILPQ96NA2 401 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 STN1Q9H668 368 aaKnown RBP25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 NMRAL1Q9HBL8 299 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 NT5MQ9NPB1 228 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 ANKRD6Q9Y2G4 727 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 L3MBTL1Q9Y468 752 aa25.53■■□□□ 1.68
TMEM55B-201ENST00000250489 BRCA2P51587 3418 aa25.52■■□□□ 1.68
TMEM55B-201ENST00000250489 SLC12A8A0AV02 714 aa25.52■■□□□ 1.68
TMEM55B-201ENST00000250489 KDELC2Q7Z4H8 507 aa25.52■■□□□ 1.68
TMEM55B-201ENST00000250489 COMMD8Q9NX08 183 aa25.52■■□□□ 1.68
TMEM55B-201ENST00000250489 ZNF212Q9UDV6 495 aa25.52■■□□□ 1.68
TMEM55B-201ENST00000250489 RPL26L1Q9UNX3 145 aaKnown RBP25.52■■□□□ 1.68
TMEM55B-201ENST00000250489 GREB1Q4ZG55 1949 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 DRGXA6NNA5 263 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 NT5C1B-RDH14C9J2C7 533 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 SIN3BO75182 1162 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 SERPINA6P08185 405 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 HMBSP08397 361 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 MPP1Q00013 466 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 SLC10A7Q0GE19 358 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 SMARCB1Q12824 385 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 ELAVL2Q12926 359 aaKnown RBP25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 TUBB3Q13509 450 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 USP10Q14694 798 aaKnown RBP25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 PCSK7Q16549 785 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 MARC1Q5VT66 337 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 NPAS4Q8IUM7 802 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 DENND6AQ8IWF6 608 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 KLHL5Q96PQ7 755 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 C1QTNF1Q9BXJ1 281 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 SP110Q9HB58 689 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 ARNT2Q9HBZ2 717 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 ATP13A1Q9HD20 1204 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 PNPOQ9NVS9 261 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 H7C4K7 107 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 GYG2O15488 501 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 GSC2O15499 205 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 GALTP07902 379 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 PBX3P40426 434 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 CNGA3Q16281 694 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 KIAA0930Q6ICG6 404 aaPredicted RBP25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 RAPH1Q70E73 1250 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 TMEM173Q86WV6 379 aaPredicted RBP25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 CRIPAKQ8N1N5 446 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 CCDC106Q9BWC9 280 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 PRKD2Q9BZL6 878 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 TAS2R1Q9NYW7 299 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 TLK1Q9UKI8 766 aa25.51■■□□□ 1.67
TMEM55B-201ENST00000250489 ZDHHC11BP0C7U3 371 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 ALOX15P16050 662 aaPredicted RBP25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 PAMP19021 973 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 ALDH18A1P54886 795 aaKnown RBP25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 DUSP4Q13115 394 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 CTBP1Q13363 440 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 WASHC2DQ5SRD0 308 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 MAVSQ7Z434 540 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 TEX26Q8N6G2 289 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 PSMG2Q969U7 264 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 PABPC5Q96DU9 382 aaKnown RBP25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 TMEM175Q9BSA9 504 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 PCDHB12Q9Y5F1 795 aa25.5■■□□□ 1.67
TMEM55B-201ENST00000250489 PHGDHO43175 533 aaKnown RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 SAT1P21673 171 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 MAXP61244 160 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 RING1Q06587 406 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 SEPT6Q14141 434 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 ARMC3Q5W041 872 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 TAS1R1Q7RTX1 841 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 SLC41A1Q8IVJ1 513 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 SEZ6LQ9BYH1 1024 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms