RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 APOBEC2Q9Y235 224 aaKnown RBP15.99■□□□□ 0.15
LRFN1-201ENST00000248668 AAR2Q9Y312 384 aaKnown RBP15.99■□□□□ 0.15
LRFN1-201ENST00000248668 CAPN14A8MX76 684 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 E9PBE3 544 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 NEMP1O14524 444 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 KLHL41O60662 606 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 CPB1P15086 417 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 TYMPP19971 482 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 TAF11Q15544 211 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 MGAT5BQ3V5L5 792 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 ACSBG2Q5FVE4 666 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 RAP1GAP2Q684P5 730 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 NUP93Q8N1F7 819 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.98■□□□□ 0.15
LRFN1-201ENST00000248668 HMCESQ96FZ2 354 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 UROC1Q96N76 676 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 TSC22D3Q99576 134 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 OMDQ99983 421 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 GPR62Q9BZJ7 368 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 PAPOLBQ9NRJ5 636 aaKnown RBP15.98■□□□□ 0.15
LRFN1-201ENST00000248668 MATN3O15232 486 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 TPBGLP0DKB5 382 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 TBX4P57082 545 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 EIF4EBP2Q13542 120 aaPredicted RBP15.98■□□□□ 0.15
LRFN1-201ENST00000248668 KRT72Q14CN4 511 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 DENND5AQ6IQ26 1287 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 ZC3HC1Q86WB0 502 aaKnown RBP15.98■□□□□ 0.15
LRFN1-201ENST00000248668 COLGALT2Q8IYK4 626 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 CD99L2Q8TCZ2 262 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 SPECC1L-ADORA2AF8WAN1 911 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 SLC25A3Q00325 362 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 SP3Q02447 781 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 SLC10A7Q0GE19 358 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 RCN1Q15293 331 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 CFAP157Q5JU67 520 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 ZNF470Q6ECI4 717 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 PKN3Q6P5Z2 889 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 RNF135Q8IUD6 432 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 EFCAB3Q8N7B9 438 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 NDNQ99608 321 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 NOL6Q9H6R4 1146 aaKnown RBP15.98■□□□□ 0.15
LRFN1-201ENST00000248668 TLE6Q9H808 572 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 RGS18Q9NS28 235 aa15.98■□□□□ 0.15
LRFN1-201ENST00000248668 G3V2L1 256 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 IDH3AP50213 366 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 THOC5Q13769 683 aaKnown RBP15.97■□□□□ 0.15
LRFN1-201ENST00000248668 BLMHQ13867 455 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 C10orf120Q5SQS8 335 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 MANEALQ5VSG8 457 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 LINC00523Q86TU6 105 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 LDB1Q86U70 411 aaPredicted RBP15.97■□□□□ 0.15
LRFN1-201ENST00000248668 MFSD6LQ8IWD5 586 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 ABI1Q8IZP0 508 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 RTL3Q8N8U3 475 aaKnown RBP15.97■□□□□ 0.15
LRFN1-201ENST00000248668 GIPC2Q8TF65 315 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 FBXO32Q969P5 355 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 SERPINB11Q96P15 392 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 CCDC106Q9BWC9 280 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 CRISPLD1Q9H336 500 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 CYP4F11Q9HBI6 524 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 RUVBL2Q9Y230 463 aaKnown RBP15.97■□□□□ 0.15
LRFN1-201ENST00000248668 TTC36A6NLP5 189 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 TIMM44O43615 452 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 BUD23O43709 281 aaKnown RBP15.97■□□□□ 0.15
LRFN1-201ENST00000248668 CAPN15O75808 1086 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 ANXA9O76027 345 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 CD86P42081 329 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 MLLT6P55198 1093 aaPredicted RBP15.97■□□□□ 0.15
LRFN1-201ENST00000248668 LAMB3Q13751 1172 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 CCDC6Q16204 474 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 PCID2Q5JVF3 399 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 SPDYAQ5MJ70 313 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 CEP97Q8IW35 865 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 RAB3IL1Q8TBN0 382 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 MRGPRX2Q96LB1 330 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 IL12RB2Q99665 862 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 TUBB6Q9BUF5 446 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 KIFC1Q9BW19 673 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 TAGLN3Q9UI15 199 aa15.97■□□□□ 0.15
LRFN1-201ENST00000248668 MAGEB16A2A368 324 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 KCNU1A8MYU2 1149 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 FGF10O15520 208 aaPredicted RBP15.96■□□□□ 0.15
LRFN1-201ENST00000248668 TRPA1O75762 1119 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 SKIP12755 728 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 MPSTP25325 297 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 ARNTP27540 789 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 SLC1A2P43004 574 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 WNT3AP56704 352 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 DSC2Q02487 901 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 TBC1D25Q3MII6 688 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 ARTNQ5T4W7 220 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 FAM219BQ5XKK7 198 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 DCP1BQ8IZD4 617 aaKnown RBP15.96■□□□□ 0.15
LRFN1-201ENST00000248668 PPHLN1Q8NEY8 458 aaKnown RBP15.96■□□□□ 0.15
LRFN1-201ENST00000248668 MAPK15Q8TD08 544 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 PSMG2Q969U7 264 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 FCRL5Q96RD9 977 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 TRIM62Q9BVG3 475 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 GATA5Q9BWX5 397 aaPredicted RBP15.96■□□□□ 0.15
LRFN1-201ENST00000248668 ACE2Q9BYF1 805 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms