RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 PTGIRP43119 386 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 CENPAP49450 140 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 RPS7P62081 194 aaKnown RBP20.08■□□□□ 0.81
SOX4-201ENST00000244745 HDHD2Q9H0R4 259 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 RGS14O43566 566 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 NELFEP18615 380 aaKnown RBP20.08■□□□□ 0.81
SOX4-201ENST00000244745 CDH3P22223 829 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 RAB10P61026 200 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 ZIK1Q3SY52 487 aaPredicted RBP20.08■□□□□ 0.81
SOX4-201ENST00000244745 LIPMQ5VYY2 423 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 ABRAXAS1Q6UWZ7 409 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 UNC93AQ86WB7 457 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 PTGR2Q8N8N7 351 aaPredicted RBP20.08■□□□□ 0.81
SOX4-201ENST00000244745 CLPTM1LQ96KA5 538 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 DEPDC7Q96QD5 511 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 SLC7A5P2Q9GIP4 190 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 SENP6Q9GZR1 1112 aaPredicted RBP20.08■□□□□ 0.81
SOX4-201ENST00000244745 S100A14Q9HCY8 104 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 HES2Q9Y543 173 aa20.08■□□□□ 0.81
SOX4-201ENST00000244745 CAPN1P07384 714 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 BPGMP07738 259 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 ANGPT1Q15389 498 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 CLNKQ7Z7G1 428 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 C12orf56Q8IXR9 622 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 EZH1Q92800 747 aaPredicted RBP20.08■□□□□ 0.8
SOX4-201ENST00000244745 POLR1BQ9H9Y6 1135 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 BUD23O43709 281 aaKnown RBP20.08■□□□□ 0.8
SOX4-201ENST00000244745 ATP5F1P24539 256 aaPredicted RBP20.08■□□□□ 0.8
SOX4-201ENST00000244745 BROXQ5VW32 411 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 ACTRT2Q8TDY3 377 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 NAT14Q8WUY8 206 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 EMILIN2Q9BXX0 1053 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 ADAM30Q9UKF2 790 aa20.08■□□□□ 0.8
SOX4-201ENST00000244745 KIF1AQ12756 1690 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ST13P50502 369 aaKnown RBP20.07■□□□□ 0.8
SOX4-201ENST00000244745 LRP10Q7Z4F1 713 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 TLCD1Q96CP7 247 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 BTRCQ9Y297 605 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 PEX11AO75192 247 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 NPR3P17342 541 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 MSH3P20585 1137 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 STARD3Q14849 445 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ZNF284Q2VY69 593 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ARHGAP15Q53QZ3 475 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 SPANXN2Q5MJ10 180 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 CDH24Q86UP0 819 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ZBTB46Q86UZ6 589 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ELOVL4Q9GZR5 314 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 PDHXO00330 501 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 FCGRTP55899 365 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 DGCR6Q14129 220 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 KLHL17Q6TDP4 642 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 MON1BQ7L1V2 547 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ENKURQ8TC29 256 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 GLT1D1Q96MS3 346 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 PRDM12Q9H4Q4 367 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 CHKBQ9Y259 395 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 RPTORQ8N122 1335 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ZNF7P17097 686 aaPredicted RBP20.07■□□□□ 0.8
SOX4-201ENST00000244745 PTPRAP18433 802 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 TKTP29401 623 aaKnown RBP20.07■□□□□ 0.8
SOX4-201ENST00000244745 COX10Q12887 443 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 C16orf59Q7L2K0 433 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 DNAJB14Q8TBM8 379 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 SENP8Q96LD8 212 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ACE2Q9BYF1 805 aaPredicted RBP20.07■□□□□ 0.8
SOX4-201ENST00000244745 RMI1Q9H9A7 625 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 HBS1LQ9Y450 684 aaKnown RBP20.07■□□□□ 0.8
SOX4-201ENST00000244745 KNDC1Q76NI1 1749 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 CYP2A7P20853 494 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 CCDC80Q76M96 950 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 CMC1Q7Z7K0 106 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 AMIGO2Q86SJ2 522 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 ASZ1Q8WWH4 475 aa20.07■□□□□ 0.8
SOX4-201ENST00000244745 CKMP06732 381 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 CCNB1P14635 433 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 HOXA10P31260 410 aaPredicted RBP20.06■□□□□ 0.8
SOX4-201ENST00000244745 MMP14P50281 582 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 NFE2Q16621 373 aaPredicted RBP20.06■□□□□ 0.8
SOX4-201ENST00000244745 PPP1R26Q5T8A7 1209 aaPredicted RBP20.06■□□□□ 0.8
SOX4-201ENST00000244745 OSBPL11Q9BXB4 747 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 RAD21L1Q9H4I0 556 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 MRC1P22897 1456 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 PNMA8CA0A1B0GUJ8 204 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 HNRNPLP14866 589 aaKnown RBP eCLIP20.06■□□□□ 0.8
SOX4-201ENST00000244745 CATSPERGQ6ZRH7 1159 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 FAM45AQ8TCE6 357 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 SLC44A1Q8WWI5 657 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 NMUR2Q9GZQ4 415 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 KRCC1Q9NPI7 259 aaPredicted RBP20.06■□□□□ 0.8
SOX4-201ENST00000244745 RFX3P48380 749 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 HELQQ8TDG4 1101 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 TADA1Q96BN2 335 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 NPAS2Q99743 824 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 SPRTNQ9H040 489 aaPredicted RBP20.06■□□□□ 0.8
SOX4-201ENST00000244745 PLLPQ9Y342 182 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 A8MX80 341 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 C4BPBP20851 252 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 OR7A2PQ8NGA2 310 aa20.06■□□□□ 0.8
SOX4-201ENST00000244745 SERAC1Q96JX3 654 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms