RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CLLU1OSQ5K130 101 aa22.24■■□□□ 1.15
RNF39-201ENST00000244360 TIGD7Q6NT04 549 aaPredicted RBP22.24■■□□□ 1.15
RNF39-201ENST00000244360 ZC3HC1Q86WB0 502 aaKnown RBP22.24■■□□□ 1.15
RNF39-201ENST00000244360 FUBP3Q96I24 572 aaKnown RBP eCLIP22.24■■□□□ 1.15
RNF39-201ENST00000244360 C1orf74Q96LT6 269 aa22.24■■□□□ 1.15
RNF39-201ENST00000244360 RHOJQ9H4E5 214 aa22.24■■□□□ 1.15
RNF39-201ENST00000244360 CAB39LQ9H9S4 337 aa22.24■■□□□ 1.15
RNF39-201ENST00000244360 NDFIP2Q9NV92 336 aa22.24■■□□□ 1.15
RNF39-201ENST00000244360 OSER1Q9NX31 292 aa22.24■■□□□ 1.15
RNF39-201ENST00000244360 MAGED2Q9UNF1 606 aaPredicted RBP22.24■■□□□ 1.15
RNF39-201ENST00000244360 PCDHB12Q9Y5F1 795 aa22.24■■□□□ 1.15
RNF39-201ENST00000244360 PLXNA3P51805 1871 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 MYO16Q9Y6X6 1858 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 ZNF195O14628 629 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 MT-CYBP00156 380 aaPredicted RBP22.23■■□□□ 1.15
RNF39-201ENST00000244360 CPOXP36551 454 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 ABCG1P45844 678 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 TUBP50607 506 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 IRF9Q00978 393 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 DSG1Q02413 1049 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 ITGA9Q13797 1035 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 ANO4Q32M45 955 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 COLGALT2Q8IYK4 626 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 DCP1BQ8IZD4 617 aaKnown RBP22.23■■□□□ 1.15
RNF39-201ENST00000244360 ACVR1CQ8NER5 493 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 PTCD2Q8WV60 388 aaKnown RBP22.23■■□□□ 1.15
RNF39-201ENST00000244360 LINC01599Q8WXQ3 324 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 SLC39A13Q96H72 371 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 C8orf48Q96LL4 319 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 MRM3Q9HC36 420 aaKnown RBP22.23■■□□□ 1.15
RNF39-201ENST00000244360 CENPFP49454 3210 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 E2F8A0AVK6 867 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 AHCYL1O43865 530 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 CALRP27797 417 aaKnown RBP22.23■■□□□ 1.15
RNF39-201ENST00000244360 MLLT6P55198 1093 aaPredicted RBP22.23■■□□□ 1.15
RNF39-201ENST00000244360 FAM189BP81408 668 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 SLC24A5Q71RS6 500 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 C14orf80Q86SX3 495 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 MON1AQ86VX9 555 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 SCN4BQ8IWT1 228 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 UCMAQ8WVF2 138 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 TLR6Q9Y2C9 796 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 ANKRD6Q9Y2G4 727 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 ASB3Q9Y575 518 aa22.23■■□□□ 1.15
RNF39-201ENST00000244360 TMEM114B3SHH9 223 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 HLA-DQB2P05538 268 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 FESP07332 822 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 CKBP12277 381 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 COPAP53621 1224 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 MBTPS1Q14703 1052 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 GRM3Q14832 879 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 NOMO2Q5JPE7 1267 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 POTEHQ6S545 545 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 LCA5Q86VQ0 697 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 TNS4Q8IZW8 715 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 IPMKQ8NFU5 416 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 GATA6Q92908 595 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 FICDQ9BVA6 458 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 SPATS2LQ9NUQ6 558 aaKnown RBP22.22■■□□□ 1.15
RNF39-201ENST00000244360 PNPOQ9NVS9 261 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 ABI2Q9NYB9 513 aaPredicted RBP22.22■■□□□ 1.15
RNF39-201ENST00000244360 PDP2Q9P2J9 529 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 NYNRINQ9P2P1 1898 aaKnown RBP22.22■■□□□ 1.15
RNF39-201ENST00000244360 KIF3CO14782 793 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 H2AFYO75367 372 aaKnown RBP22.22■■□□□ 1.15
RNF39-201ENST00000244360 ELNP15502 786 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 CRABP2P29373 138 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 ACLYP53396 1101 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 NFE2Q16621 373 aaPredicted RBP22.22■■□□□ 1.15
RNF39-201ENST00000244360 OR52E8Q6IFG1 317 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 JADE3Q92613 823 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 TRAPPC9Q96Q05 1148 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 C1QTNF1Q9BXJ1 281 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 NMRAL1Q9HBL8 299 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 ENTPD7Q9NQZ7 604 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 MID2Q9UJV3 735 aa22.22■■□□□ 1.15
RNF39-201ENST00000244360 A0A088AWK7 358 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 SIN3BO75182 1162 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 APOA4P06727 396 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 DNAJB1P25685 340 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 ARCN1P48444 511 aaKnown RBP22.21■■□□□ 1.15
RNF39-201ENST00000244360 IDH3AP50213 366 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 PIK3R6Q5UE93 754 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 ARMC3Q5W041 872 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 ZNF683Q8IZ20 524 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 NUP93Q8N1F7 819 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 FATE1Q969F0 183 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 CMTM5Q96DZ9 223 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 CLPTM1LQ96KA5 538 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 TSC22D3Q99576 134 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 NOL6Q9H6R4 1146 aaKnown RBP22.21■■□□□ 1.15
RNF39-201ENST00000244360 NUDT5Q9UKK9 219 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 TCAF1Q9Y4C2 921 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 CCNT2O60583 730 aaKnown RBP22.21■■□□□ 1.15
RNF39-201ENST00000244360 GABRB3P28472 473 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 PEX19P40855 299 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 PAPOLAP51003 745 aaKnown RBP22.21■■□□□ 1.15
RNF39-201ENST00000244360 UGP2Q16851 508 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 KBTBD2Q8IY47 623 aa22.21■■□□□ 1.15
RNF39-201ENST00000244360 PPHLN1Q8NEY8 458 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms