RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 ZBED5Q49AG3 693 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 OGFOD2Q6N063 350 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 CHERPQ8IWX8 916 aaKnown RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 OR52K1Q8NGK4 314 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 DQX1Q8TE96 717 aaKnown RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 LPAR1Q92633 364 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 FAM149B1Q96BN6 582 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ATG4CQ96DT6 458 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ASB9Q96DX5 294 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 SLC29A1Q99808 456 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 DEFB129Q9H1M3 183 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ARMC7Q9H6L4 198 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 LRRC40Q9H9A6 602 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 POLR1BQ9H9Y6 1135 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 IARS2Q9NSE4 1012 aaKnown RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 S100A1P23297 94 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ARL2P36404 184 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 GRIA3P42263 894 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 TUBA4AP68366 448 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 NIPAL4Q0D2K0 466 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 MAPRE2Q15555 327 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 LIPMQ5VYY2 423 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 DHFR2Q86XF0 187 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 C12orf29Q8N999 325 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 TMEM102Q8N9M5 508 aaPredicted RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 HM13Q8TCT9 377 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 SLC10A4Q96EP9 437 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 APOL2Q9BQE5 337 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ZBTB26Q9HCK0 441 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ZDHHC2Q9UIJ5 367 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 RIPK3Q9Y572 518 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 TRIM17Q9Y577 477 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 COL5A3P25940 1745 aaPredicted RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 NRAPQ86VF7 1730 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 E7ENX8 843 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 KPNA4O00629 521 aaPredicted RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 FBP2O00757 339 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 TIMM44O43615 452 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ENDOD1O94919 500 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 STBD1O95210 358 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ATG7O95352 703 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 APOA4P06727 396 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 MLNP12872 115 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 UGT1A6P19224 532 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 UGT1A1P22309 533 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 UGT1A4P22310 534 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 UGT1A3P35503 534 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 UGT1A5P35504 534 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 NDST1P52848 882 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 RELAQ04206 551 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 SPANXN3Q5MJ09 141 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 ATF7IP2Q5U623 682 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 CNTD1Q8N815 330 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 TNIP2Q8NFZ5 429 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 HDAC2Q92769 488 aaKnown RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 PLEKHA8Q96JA3 519 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 RBBP8Q99708 897 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 GPATCH1Q9BRR8 931 aaKnown RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 REXO4Q9GZR2 422 aaKnown RBP9.38□□□□□ -0.91
SRSF6-201ENST00000244020 XYLT2Q9H1B5 865 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 HIPK3Q9H422 1215 aa9.38□□□□□ -0.91
SRSF6-201ENST00000244020 A0A1W2PPW3 197 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TRPC5OSA6NMA1 111 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 KCNK1O00180 336 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 PAPSS1O43252 624 aaPredicted RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 HTRA2O43464 458 aaPredicted RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ALDH1A2O94788 518 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 MT-CO1P00395 513 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 FAM163BP0C2L3 166 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 MAGEA6P43360 314 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 STAT5BP51692 787 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 POU5F1BQ06416 359 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 BNIP3Q12983 259 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 NR1D2Q14995 579 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ZNF829Q3KNS6 432 aaPredicted RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TBCELQ5QJ74 424 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 HPDLQ96IR7 371 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 PPP1R16BQ96T49 567 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 OMDQ99983 421 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 CNOT11Q9UKZ1 510 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 RWDD3Q9Y3V2 267 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 COPG1Q9Y678 874 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ADAMTSL1Q8N6G6 1762 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ADGRA2Q96PE1 1338 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 CFAP99D6REC4 459 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 J3QRK9 145 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TADA2AO75478 443 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ZNF12P17014 697 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 MAGEA3P43357 314 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ATXN1P54253 815 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TXNL4AP83876 142 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 RHDQ02161 417 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 FASTKQ14296 549 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TJAP1Q5JTD0 557 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 THOC7Q6I9Y2 204 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 CYS1Q717R9 158 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 SAPCD2Q86UD0 394 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 CAMK1DQ8IU85 385 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 RNF135Q8IUD6 432 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms