RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 METTL18O95568 372 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 PDGFBP01127 241 aaPredicted RBP20.46■□□□□ 0.87
SNRPA-201ENST00000243563 CHRNB1P11230 501 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 NFKB1P19838 968 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 RPL22P35268 128 aaKnown RBP20.46■□□□□ 0.87
SNRPA-201ENST00000243563 DSC2Q02487 901 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 FAXCQ5TGI0 409 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 GSTA5Q7RTV2 222 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 ZNF513Q8N8E2 541 aaPredicted RBP20.46■□□□□ 0.87
SNRPA-201ENST00000243563 OR6K2Q8NGY2 324 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 SLCO2A1Q92959 643 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 SPATA13Q96N96 652 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 PSKH2Q96QS6 385 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 HINFPQ9BQA5 517 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 CINPQ9BW66 212 aaPredicted RBP20.46■□□□□ 0.87
SNRPA-201ENST00000243563 TBC1D17Q9HA65 648 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 KLHL8Q9P2G9 620 aaPredicted RBP20.46■□□□□ 0.87
SNRPA-201ENST00000243563 TECTAO75443 2155 aa20.46■□□□□ 0.87
SNRPA-201ENST00000243563 CFAP69A5D8W1 941 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 RIOK3O14730 519 aaKnown RBP20.45■□□□□ 0.87
SNRPA-201ENST00000243563 ADAM23O75077 832 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 GCATO75600 419 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 HNRNPLP14866 589 aaKnown RBP eCLIP20.45■□□□□ 0.87
SNRPA-201ENST00000243563 GKP32189 559 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 VPS41P49754 854 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 RENBPP51606 427 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 RHOAP61586 193 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 DR1Q01658 176 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 SLC20A2Q08357 652 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 ENPP2Q13822 863 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 ZNF235Q14590 738 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 RFTN1Q14699 578 aaPredicted RBP20.45■□□□□ 0.87
SNRPA-201ENST00000243563 ACCSLQ4AC99 568 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 PREPLQ4J6C6 727 aaPredicted RBP20.45■□□□□ 0.87
SNRPA-201ENST00000243563 JAMLQ86YT9 394 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 MMGT1Q8N4V1 131 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 IL17RCQ8NAC3 791 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 MNS1Q8NEH6 495 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 ARRDC2Q8TBH0 407 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 PTPRN2Q92932 1015 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 MGME1Q9BQP7 344 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 LRRC1Q9BTT6 524 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 SEPT3Q9UH03 358 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 STON1Q9Y6Q2 735 aa20.45■□□□□ 0.87
SNRPA-201ENST00000243563 KANSL1LA0AUZ9 987 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 ECEL1O95672 775 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 KRT14P02533 472 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 MMP2P08253 660 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 CR2P20023 1033 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 PSMB4P28070 264 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 STIP1P31948 543 aaKnown RBP20.45■□□□□ 0.86
SNRPA-201ENST00000243563 VASPP50552 380 aaPredicted RBP20.45■□□□□ 0.86
SNRPA-201ENST00000243563 UBXN2BQ14CS0 331 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 PID1Q7Z2X4 250 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 CHST14Q8NCH0 376 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 NSMCE1Q8WV22 266 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 UCMAQ8WVF2 138 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 GLOD4Q9HC38 313 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 C2orf42Q9NWW7 574 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 PLA2G4CQ9UP65 541 aa20.45■□□□□ 0.86
SNRPA-201ENST00000243563 CXorf51AA0A1B0GTR3 108 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 MTSS1O43312 755 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 BNIP3LO60238 219 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 KLF8O95600 359 aaPredicted RBP20.44■□□□□ 0.86
SNRPA-201ENST00000243563 TERF1P54274 439 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 GEMIN4P57678 1058 aaKnown RBP20.44■□□□□ 0.86
SNRPA-201ENST00000243563 SLC7A5Q01650 507 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 GAS6Q14393 721 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 SERPINA13PQ6UXR4 307 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 CCDC89Q8N998 374 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 OR2A12Q8NGT7 310 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 SPATA22Q8NHS9 363 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 RPLP0P6Q8NHW5 317 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 CASKIN2Q8WXE0 1202 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 MYLKQ15746 1914 aa20.44■□□□□ 0.86
SNRPA-201ENST00000243563 SIN3BO75182 1162 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 COL9A1P20849 921 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 PTK6Q13882 451 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 P3H1Q32P28 736 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 SYCP2LQ5T4T6 812 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 ALG1LQ6GMV1 187 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 PRPF39Q86UA1 669 aaKnown RBP20.43■□□□□ 0.86
SNRPA-201ENST00000243563 CHPFQ8IZ52 775 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 TXNDC5Q8NBS9 432 aaKnown RBP20.43■□□□□ 0.86
SNRPA-201ENST00000243563 OXNAD1Q96HP4 312 aaPredicted RBP20.43■□□□□ 0.86
SNRPA-201ENST00000243563 SEMA3CQ99985 751 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 MLPHQ9BV36 600 aaPredicted RBP20.43■□□□□ 0.86
SNRPA-201ENST00000243563 CEP44Q9C0F1 390 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 GBA3Q9H227 469 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 LMAN1LQ9HAT1 526 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 PCDH9Q9HC56 1237 aa20.43■□□□□ 0.86
SNRPA-201ENST00000243563 EVLQ9UI08 416 aaPredicted RBP20.43■□□□□ 0.86
SNRPA-201ENST00000243563 FAM170BA6NMN3 283 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 OPHN1O60890 802 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 ST8SIA6P61647 398 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 ITKQ08881 620 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 OLIG2Q13516 323 aa20.42■□□□□ 0.86
SNRPA-201ENST00000243563 DHX34Q14147 1143 aaKnown RBP20.42■□□□□ 0.86
SNRPA-201ENST00000243563 HNRNPA1L2Q32P51 320 aaKnown RBP20.42■□□□□ 0.86
SNRPA-201ENST00000243563 C9orf64Q5T6V5 341 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms