RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 BUD31P41223 144 aaPredicted RBP7.51□□□□□ -1.21
MED28-201ENST00000237380 GSTM5P46439 218 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 CRYMQ14894 314 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 KLHL12Q53G59 568 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 TMEM192Q8IY95 271 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 TDRD5Q8NAT2 981 aaKnown RBP7.51□□□□□ -1.21
MED28-201ENST00000237380 ZNF527Q8NB42 609 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 TMEM125Q96AQ2 219 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 PYCARDQ9ULZ3 195 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 SNX12Q9UMY4 172 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 PTPRMP28827 1452 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 GRXCR2A6NFK2 248 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 ZNF208O43345 1280 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 CCNT2O60583 730 aaKnown RBP7.51□□□□□ -1.21
MED28-201ENST00000237380 KLK3P07288 261 aaPredicted RBP7.51□□□□□ -1.21
MED28-201ENST00000237380 FASP25445 335 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 ARFIP1P53367 373 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 BDH1Q02338 343 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 PGM5Q15124 567 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 BTN2A1Q7KYR7 527 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 CXXC5Q7LFL8 322 aaKnown RBP7.51□□□□□ -1.21
MED28-201ENST00000237380 JAMLQ86YT9 394 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 NEK7Q8TDX7 302 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 A0A1W2PQ72 361 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 SELPP16109 830 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 MRPS25P82663 173 aaKnown RBP7.51□□□□□ -1.21
MED28-201ENST00000237380 SLC39A12Q504Y0 691 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 TIGD5Q53EQ6 642 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 ATCAYQ86WG3 371 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 TMEM145Q8NBT3 493 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 BHMTQ93088 406 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 FUT8Q9BYC5 575 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 PADI2Q9Y2J8 665 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 ASB3Q9Y575 518 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 FAM170AA1A519 330 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 TRIM64A6NGJ6 449 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 CYP2F1P24903 491 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 PEX19P40855 299 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 CDH13P55290 713 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 KDSRQ06136 332 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.51□□□□□ -1.21
MED28-201ENST00000237380 WDR45BQ5MNZ6 344 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 ACSM2BQ68CK6 577 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 AGR3Q8TD06 166 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 CASKIN2Q8WXE0 1202 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 CPB2Q96IY4 423 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 SLC9A7Q96T83 725 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 SERINC1Q9NRX5 453 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 SETD4Q9NVD3 440 aa7.51□□□□□ -1.21
MED28-201ENST00000237380 UBE2QL1A1L167 161 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 AIM2O14862 343 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 EOMESO95936 686 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 LLGL1Q15334 1064 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 BROXQ5VW32 411 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 PGM2L1Q6PCE3 622 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 EIF3MQ7L2H7 374 aaKnown RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 VASH1Q7L8A9 365 aaPredicted RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 EEF1AKMT1Q8WVE0 214 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 EFHD2Q96C19 240 aaPredicted RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 PPP1R36Q96LQ0 422 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 ERP44Q9BS26 406 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 FICDQ9BVA6 458 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 SNTG2Q9NY99 539 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 MRPL39Q9NYK5 338 aaKnown RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 PTCH2Q9Y6C5 1203 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TNS2Q63HR2 1409 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3DA0A087WVF3 549 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3IA0A087WXS9 549 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3EA0A087X179 549 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3KA0A087X1G2 549 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3FA6NER0 549 aaPredicted RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 FAM25AB3EWG3 89 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 FAM25CB3EWG5 89 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 FAM25GB3EWG6 89 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TCP11X1B4DZS4 312 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3LB9A6J9 549 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 PRODHO43272 600 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3HP0C7X1 549 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 EIF4BP23588 611 aaKnown RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 POLD2P49005 469 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 GLUD2P49448 558 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 KYNUQ16719 465 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 SLC44A4Q53GD3 710 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3GQ6DHY5 549 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3CQ6IPX1 549 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 TBC1D3Q8IZP1 549 aaPredicted RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 PIK3C3Q8NEB9 887 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 NSMCE3Q96MG7 304 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 STX16-NPEPL1H3BU86 382 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 STX16O14662 325 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 SYN3O14994 580 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 CRY1Q16526 586 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 IZUMO1Q8IYV9 350 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 C17orf53Q8N3J3 647 aaPredicted RBP7.5□□□□□ -1.21
MED28-201ENST00000237380 FAM71DQ8N9W8 422 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 PPP3R2Q96LZ3 170 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 CISHQ9NSE2 258 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 CALML5Q9NZT1 146 aa7.5□□□□□ -1.21
MED28-201ENST00000237380 PCDHB1Q9Y5F3 818 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms