RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 EIF2DP41214 584 aaKnown RBP11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 SGSHP51688 502 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 CLCN6P51797 869 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRKCQQ04759 706 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 GPS2Q13227 327 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 LRRC40Q9H9A6 602 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 GLOD4Q9HC38 313 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 SMAPO00193 183 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 LZTS3O60299 673 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 FSCBQ5H9T9 825 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 NKD2Q969F2 451 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 ERP44Q9BS26 406 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 CENPHQ9H3R5 247 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 RRAGDQ9NQL2 400 aaPredicted RBP11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 MARK1Q9P0L2 795 aa11.3□□□□□ -0.6
TNFAIP3-201ENST00000237289 UGT2B4P06133 528 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 GLULP15104 373 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PAMP19021 973 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 ITIH2P19823 946 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PPM1FP49593 454 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 IRAK1P51617 712 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 AP1S1P61966 158 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 SLC10A7Q0GE19 358 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PPIL6Q8IXY8 311 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 BLOC1S5Q8TDH9 187 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRMT1Q99873 361 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 APOL2Q9BQE5 337 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 F5P12259 2224 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 IGLV3-10A0A075B6K4 115 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PENKP01210 267 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 HLA-EP13747 358 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PSMB4P28070 264 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 NTSR1P30989 418 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PSMD8P48556 350 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 STK19P49842 368 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZNF33AQ06730 810 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 GEN1Q17RS7 908 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 CAPN12Q6ZSI9 719 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 Q6ZVU0 165 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 ALLCQ8N6M5 410 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PDCD7Q8N8D1 485 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 RSPRY1Q96DX4 576 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 RBM15Q96T37 977 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■■□ 19.4
TNFAIP3-201ENST00000237289 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 SLCO3A1Q9UIG8 710 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 UQCRHLA0A096LP55 91 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 UQCRHP07919 91 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PHBP35232 272 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 SERPINH1P50454 418 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 CUL1Q13616 776 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 ERCC6LQ2NKX8 1250 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 INO80DQ53TQ3 878 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 ATXN7L2Q5T6C5 722 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 C22orf39Q6P5X5 142 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 SRLQ86TD4 932 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 NPWQ8N729 165 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PPHLN1Q8NEY8 458 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 OR2AP1Q8NGE2 309 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 UBLCP1Q8WVY7 318 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRCCQ92733 491 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 STOML2Q9UJZ1 356 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 GOLGA8CPA6NN73 597 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 CYP2A6P11509 494 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 IL4RP24394 825 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 ARHGAP36Q6ZRI8 547 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZNF771Q7L3S4 317 aaPredicted RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 MMGT1Q8N4V1 131 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 TXNDC5Q8NBS9 432 aaKnown RBP11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PYROXD1Q8WU10 500 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 CHFRQ96EP1 664 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 TTC25Q96NG3 672 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 HPS4Q9NQG7 708 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 PCDHB9Q9Y5E1 797 aa11.29□□□□□ -0.6
TNFAIP3-201ENST00000237289 INSIG1O15503 277 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 NDUFS2O75306 463 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 PTPN3P26045 913 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 PPARGP37231 505 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 PRAMEP78395 509 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 SEMA3BQ13214 749 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 USP45Q70EL2 814 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 TSEN2Q8NCE0 465 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ADAMTS19Q8TE59 1207 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 HMGB4Q8WW32 186 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 TSGA13Q96PP4 275 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 FMO2Q99518 471 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 VPS45Q9NRW7 570 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 PKP3Q9Y446 797 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 A0A1W2PQ67 120 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ESYT3A0FGR9 886 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 C2orf81A6NN90 581 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ERI2A8K979 691 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 PDE2AO00408 941 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 TRIM24O15164 1050 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 NARSO43776 548 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZSCAN5DPP0CG00 497 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 TNFRSF4P43489 277 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZXDBP98169 803 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms