RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PYHIN1Q6K0P9 492 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 SPAG16Q8N0X2 631 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 FBXW8Q8N3Y1 598 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 ZSCAN1Q8NBB4 408 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 LPCAT1Q8NF37 534 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 DPY30Q9C005 99 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 CDC42EP4Q9H3Q1 356 aaKnown RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 NDUFAF1Q9Y375 327 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 NARSO43776 548 aaKnown RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 PLGP00747 810 aaPredicted RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 MGAT5Q09328 741 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 TTLL9Q3SXZ7 439 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 UBE2J2Q8N2K1 259 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 TEX19Q8NA77 164 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 ATG4AQ8WYN0 398 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 TAAR1Q96RJ0 339 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 TDRD1Q9BXT4 1180 aaKnown RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 GIN1Q9NXP7 522 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 OR10H1Q9Y4A9 318 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 ADORA2AP29274 412 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 CDH8P55286 799 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 CYP4F8P98187 520 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 TOP3AQ13472 1001 aaPredicted RBP11.23□□□□□ -0.61
MSH6-201ENST00000234420 IL18Q14116 193 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 NR1I3Q14994 352 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 NR6A1Q15406 480 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 RFX4Q33E94 735 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 ENOSF1Q7L5Y1 443 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 GALNTL5Q7Z4T8 443 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 ANKFN1Q8N957 763 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 SMYD1Q8NB12 490 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 TP53INP1Q96A56 240 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 TIMMDC1Q9NPL8 285 aa11.23□□□□□ -0.61
MSH6-201ENST00000234420 MAST1Q9Y2H9 1570 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 TRAV19A0A0A6YYK7 116 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 DCLK1O15075 740 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 SCN2BO60939 215 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 CPA3P15088 417 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MAN2A2P49641 1150 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 EFNA5P52803 228 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 TPTEP56180 551 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 RGS1Q08116 209 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 WDR93Q6P2C0 686 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 ADCY4Q8NFM4 1077 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 KLK6Q92876 244 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 PAFAH2Q99487 392 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 RNF38Q9H0F5 515 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MCIDASD6RGH6 385 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 I3L521 148 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MATN2O00339 956 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 FDX1P10109 184 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 ELNP15502 786 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MAT2AP31153 395 aaKnown RBP11.22□□□□□ -0.61
MSH6-201ENST00000234420 GP5P40197 560 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 XIAPP98170 497 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MAPK7Q13164 816 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 CELF6Q96J87 481 aaKnown RBP11.22□□□□□ -0.61
MSH6-201ENST00000234420 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 ADGRE3Q9BY15 652 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 PACSIN3Q9UKS6 424 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 KLRC1P26715 233 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 KCNJ2P63252 427 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 SNX32Q86XE0 403 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 ZNF276Q8N554 614 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MCOLN3Q8TDD5 553 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 TUBGCP5Q96RT8 1024 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 WDR41Q9HAD4 459 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 NMRK1Q9NWW6 199 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MAPRE3Q9UPY8 281 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 ADGRL3Q9HAR2 1447 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 ENTPD5O75356 428 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 SNX4O95219 450 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 SLC2A4P14672 509 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 TMPRSS9Q7Z410 1059 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 FRMD5Q7Z6J6 570 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MAB21L3Q8N8X9 362 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 FBXO30Q8TB52 745 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 CCDC126Q96EE4 140 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 PHF21BQ96EK2 531 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 INTS7Q9NVH2 962 aaKnown RBP11.22□□□□□ -0.61
MSH6-201ENST00000234420 DDX43Q9NXZ2 648 aaKnown RBP11.22□□□□□ -0.61
MSH6-201ENST00000234420 TMEM5Q9Y2B1 443 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 PVALEFA0A1B0GWK0 134 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 MAGEB2O15479 319 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 CIAO1O76071 339 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 SLC25A27O95847 323 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 PRG2P13727 222 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 NPEPPSP55786 919 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 CDC42EP1Q00587 391 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 NYAP1Q6ZVC0 841 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 ZNF280BQ86YH2 543 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 CAMK1DQ8IU85 385 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 RADILQ96JH8 1075 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 BPIFA1Q9NP55 256 aa11.22□□□□□ -0.61
MSH6-201ENST00000234420 ABHD14A-ACY1A0A1B0GW23 586 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 ZSCAN5BA6NJL1 495 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 HOXA2O43364 376 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 HBP1O60381 514 aa11.21□□□□□ -0.61
MSH6-201ENST00000234420 PRH1P02810 166 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms