RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ST3GAL2Q16842 350 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 PLA2G2CQ5R387 149 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 ARTNQ5T4W7 220 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 C9orf64Q5T6V5 341 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 DAB2IPQ5VWQ8 1189 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 TMEM139Q8IV31 216 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 LRRC8AQ8IWT6 810 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 ACRBPQ8NEB7 543 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 FAM71BQ8TC56 605 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.5□□□□□ -0.57
SF3B6-201ENST00000233468 HMCESQ96FZ2 354 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 LOXL4Q96JB6 756 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 MKRN2Q9H000 416 aaKnown RBP11.5□□□□□ -0.57
SF3B6-201ENST00000233468 RSPH9Q9H1X1 276 aaPredicted RBP11.5□□□□□ -0.57
SF3B6-201ENST00000233468 LRRC19Q9H756 370 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 CD248Q9HCU0 757 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 ITM2CQ9NQX7 267 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 NDFIP2Q9NV92 336 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 HAUS2Q9NVX0 235 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 ALG6Q9Y672 507 aa11.5□□□□□ -0.57
SF3B6-201ENST00000233468 CEP192Q8TEP8 1941 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 LRRD1A4D1F6 860 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 C3orf80F5H4A9 247 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 DFFAO00273 331 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 MCF2LO15068 1137 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 ZMPSTE24O75844 475 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 PRNPP04156 253 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 PTMAP06454 111 aaKnown RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 CCDC175P0C221 793 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 TCF4P15884 667 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 MX2P20592 715 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 C5AR1P21730 350 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 CD6P30203 668 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 PI4KAP42356 2102 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 DNA2P51530 1060 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 COPAP53621 1224 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 TAS2R40P59535 323 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 SNRPD1P62314 119 aaKnown RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 RFTN1Q14699 578 aaPredicted RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 PLK5Q496M5 336 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 ANKRD20A8PQ5CZ79 823 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 STPG1Q5TH74 334 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 TXNRD3NBQ6F5E7 133 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 LINGO4Q6UY18 593 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 USP30Q70CQ3 517 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 BZW1Q7L1Q6 419 aaKnown RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 LPCAT2Q7L5N7 544 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 BBS5Q8N3I7 341 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 RNF10Q8N5U6 811 aaKnown RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 ZNF366Q8N895 744 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 C12orf50Q8NA57 414 aaPredicted RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 TPCN2Q8NHX9 752 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 KIAA1524Q8TCG1 905 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 GANCQ8TET4 914 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 FRS2Q8WU20 508 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 TSC1Q92574 1164 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 PTPRN2Q92932 1015 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 PPP1R16AQ96I34 528 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 LRIG1Q96JA1 1093 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 ZC3H10Q96K80 434 aaKnown RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 ZNF830Q96NB3 372 aaPredicted RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 DUSP15Q9H1R2 295 aaPredicted RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 SP110Q9HB58 689 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 DYRK4Q9NR20 520 aa11.49□□□□□ -0.57
SF3B6-201ENST00000233468 UBA2Q9UBT2 640 aaPredicted RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 RALYQ9UKM9 306 aaKnown RBP11.49□□□□□ -0.57
SF3B6-201ENST00000233468 BNIP3LO60238 219 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 PRAMEF11O60813 436 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 GSRP00390 522 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 MT-CO1P00395 513 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 IL1BP01584 269 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 KRT1P04264 644 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 TNNT1P13805 278 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 AMPD1P23109 780 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 KDELR1P24390 212 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 MPLP40238 635 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 NUMBP49757 651 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 PAPOLAP51003 745 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 ARSEP51690 589 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 RPS14P62263 151 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 ARF5P84085 180 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 TFDP2Q14188 446 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 DPYSL3Q14195 570 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 GRM3Q14832 879 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 CST6Q15828 149 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 MAP7D1Q3KQU3 841 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 CARD16Q5EG05 197 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 AFMIDQ63HM1 303 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 C22orf39Q6P5X5 142 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 Q6ZVU0 165 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 MMAAQ8IVH4 418 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 RCOR2Q8IZ40 523 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 STK40Q8N2I9 435 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 ATPAF2Q8N5M1 289 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 TTC13Q8NBP0 860 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 TMIEQ8NEW7 156 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 FOXJ1Q92949 421 aa11.48□□□□□ -0.57
SF3B6-201ENST00000233468 RBM41Q96IZ5 413 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 CELF6Q96J87 481 aaKnown RBP11.48□□□□□ -0.57
SF3B6-201ENST00000233468 ZNF599Q96NL3 588 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms