RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SNX9Q9Y5X1 595 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 KCNU1A8MYU2 1149 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 RNF103O00237 685 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 CLIC3O95833 236 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 C2P06681 752 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 POLBP06746 335 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 ENO2P09104 434 aaPredicted RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 GRIA4P48058 902 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 AP3M2P53677 418 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 PDK2Q15119 407 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 CLPPQ16740 277 aaPredicted RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 NEPROQ6NW34 567 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 KDELC2Q7Z4H8 507 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 TBC1D15Q8TC07 691 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 ITPKCQ96DU7 683 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 CERS2Q96G23 380 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 FCRL3Q96P31 734 aaPredicted RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 SLC39A3Q9BRY0 314 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 NMRAL1Q9HBL8 299 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 PNPLA3Q9NST1 481 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 CCDC167Q9P0B6 97 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 KLHL8Q9P2G9 620 aaPredicted RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 GMPR2Q9P2T1 348 aaKnown RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 WARS2Q9UGM6 360 aaKnown RBP14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 ZDHHC2Q9UIJ5 367 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 RIMS3Q9UJD0 308 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 AURKCQ9UQB9 309 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 PCDHB12Q9Y5F1 795 aa14.36□□□□□ -0.11
PCDHB3-201ENST00000231130 FAM149AA5PLN7 773 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 BCL10O95999 233 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 EPHX2P34913 555 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 GP5P40197 560 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 MCCD1P59942 119 aaPredicted RBP14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 IFRD2Q12894 506 aaPredicted RBP14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 LY6KQ17RY6 165 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 ZC3H7AQ8IWR0 971 aaKnown RBP14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 SULF1Q8IWU6 871 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 MCUQ8NE86 351 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 KBTBD7Q8WVZ9 684 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 SLC29A1Q99808 456 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 ZBED2Q9BTP6 218 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 DEFB129Q9H1M3 183 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 MINDY3Q9H8M7 445 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 IARS2Q9NSE4 1012 aaKnown RBP14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 SQORQ9Y6N5 450 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 WNK3Q9BYP7 1800 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 RNF103-CHMP3A0A140T963 221 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 ZBBXA8MT70 800 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 H3BNH8 94 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 AP3B1O00203 1094 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 CILPO75339 1184 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 VAPBO95292 243 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 EGFRP00533 1210 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 TFEBP19484 476 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 BFSP2Q13515 415 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 CAMK2BQ13554 666 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 TMC5Q6UXY8 1006 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 PRR23BQ6ZRT6 265 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 IQCF2Q8IXL9 164 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 CALML6Q8TD86 181 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 LPAR1Q92633 364 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 CYP4F12Q9HCS2 524 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 KIAA1522Q9P206 1035 aaPredicted RBP14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 DGKBQ9Y6T7 804 aa14.35□□□□□ -0.11
PCDHB3-201ENST00000231130 AKAP10O43572 662 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 TIPRLO75663 272 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 HNRNPLP14866 589 aaKnown RBP eCLIP14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 STXBP2Q15833 593 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 BCL2A1Q16548 175 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 DGKDQ16760 1214 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 PHKG1Q16816 387 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ZBED5Q49AG3 693 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 GLRA4Q5JXX5 417 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 LRRC8EQ6NSJ5 796 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 RWDD4Q6NW29 188 aaKnown RBP14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ALDH16A1Q8IZ83 802 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 CLIP4Q8N3C7 705 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 TSNARE1Q96NA8 513 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 TLK1Q9UKI8 766 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 LOXHD1Q8IVV2 1947 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 KPNA7A9QM74 516 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 WNT10BO00744 389 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ENDOD1O94919 500 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ATP5BP06576 529 aaKnown RBP14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 PRDX6P30041 224 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 TMEM132BQ14DG7 1078 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 MGAT5BQ3V5L5 792 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 CERCAMQ5T4B2 595 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 TAS2R42Q7RTR8 314 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 ARNTL2Q8WYA1 636 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 CDHR1Q96JP9 859 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 RNF38Q9H0F5 515 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 FAM96AQ9H5X1 160 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 EFCAB1Q9HAE3 211 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 MKS1Q9NXB0 559 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 SFMBT1Q9UHJ3 866 aa14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 RUVBL2Q9Y230 463 aaKnown RBP14.34□□□□□ -0.11
PCDHB3-201ENST00000231130 C9JVG2 144 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms