RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 CCDC189A1A4V9 331 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 SIGLEC16A6NMB1 481 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 WARSP23381 471 aaKnown RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 ATP5C1P36542 298 aaKnown RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 TAF5Q15542 800 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 NDUFAF6Q330K2 333 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 RNF44Q7L0R7 432 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 EIF3MQ7L2H7 374 aaKnown RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 GRIN3AQ8TCU5 1115 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 ADAM2Q99965 735 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 KIFC1Q9BW19 673 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 TMEM134Q9H6X4 195 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 FBXO6Q9NRD1 293 aaPredicted RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 PSMG1O95456 288 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 CTSEP14091 401 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 PRKAG1P54619 331 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 SQLEQ14534 574 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 RAP1GAP2Q684P5 730 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 PMF1Q6P1K2 205 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 COLGALT2Q8IYK4 626 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 NKAPQ8N5F7 415 aaKnown RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 COQ7Q99807 217 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF232Q9UNY5 417 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 RECQL5O94762 991 aaPredicted RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 CATP04040 527 aaKnown RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 HIST1H2ABP04908 130 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 LGALS2P05162 132 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 CCDC166P0CW27 439 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 TOP3AQ13472 1001 aaPredicted RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 MAMLD1Q13495 774 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 TAB1Q15750 504 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 HIST3H2AQ7L7L0 130 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 HIST1H2ACQ93077 130 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 DNAJC1Q96KC8 554 aaKnown RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 LRRC14BA6NHZ5 514 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 STX11O75558 287 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 COPZ1P61923 177 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 INTS11Q5TA45 600 aaKnown RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 FBXL16Q8N461 479 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 OMDQ99983 421 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 BCL2L14Q9BZR8 327 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 PORCNQ9H237 461 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 RRAGCQ9HB90 399 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 DDX4Q9NQI0 724 aaKnown RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 GSTK1Q9Y2Q3 226 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 CASP5P51878 434 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 MZT2AQ6P582 158 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 AGMOQ6ZNB7 445 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 GAD1Q99259 594 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 MLPHQ9BV36 600 aaPredicted RBP11.68□□□□□ -0.54
LAMA4-201ENST00000230538 ASB8Q9H765 288 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 MAP10Q9P2G4 905 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 FBXL21Q9UKT6 434 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 FZD1Q9UP38 647 aa11.68□□□□□ -0.54
LAMA4-201ENST00000230538 TEX28O15482 410 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 TRUB2O95900 331 aaKnown RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 TLX1P31314 330 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 IRF8Q02556 426 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 KCTD19Q17RG1 926 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 WSCD1Q658N2 575 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 IQSEC1Q6DN90 963 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 TSHZ1Q6ZSZ6 1077 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF557Q8N988 423 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 MAGEE2Q8TD90 523 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 COL26A1Q96A83 441 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 OMA1Q96E52 524 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF184Q99676 751 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 DNMT3LQ9UJW3 386 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 MROH2AA6NES4 1674 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 FAM237BA0A1B0GVD1 139 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 DDNO94850 711 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 EPORP19235 508 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 CCNA2P20248 432 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 PAX7P23759 505 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 MAPKAPK2P49137 400 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 SNRPD1P62314 119 aaKnown RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 BEX3Q00994 111 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ZNHIT3Q15649 155 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 PABPC1LQ4VXU2 614 aaKnown RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ZC3H7AQ8IWR0 971 aaKnown RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 OR52L1Q8NGH7 329 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 UBE2E3Q969T4 207 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 MAML3Q96JK9 1138 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 UROC1Q96N76 676 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ADAM28Q9UKQ2 775 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 COQ6Q9Y2Z9 468 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 TRAV19A0A0A6YYK7 116 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 CDC42P60953 191 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 CNGA2Q16280 664 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 NDUFA5Q16718 116 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ZC3H12AQ5D1E8 599 aaKnown RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 HYIQ5T013 277 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 KLHL24Q6TFL4 600 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 AFTPHQ6ULP2 937 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 IKBIPQ70UQ0 350 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 MARK2Q7KZI7 788 aaKnown RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 PALB2Q86YC2 1186 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 PPIEQ9UNP9 301 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms