RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CACNG4Q9UBN1 327 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 MSRAQ9UJ68 235 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 HEY1Q9Y5J3 304 aa20.89■□□□□ 0.93
SNX3-201ENST00000230085 LINC01553A4QN01 128 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 LINC00271P0C7V0 271 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 DNAJB2P25686 324 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 GP5P40197 560 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 GARSP41250 739 aaKnown RBP20.88■□□□□ 0.93
SNX3-201ENST00000230085 RAP1GAPP47736 663 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 RALGAPA2Q2PPJ7 1873 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 C15orf59Q2T9L4 293 aaPredicted RBP20.88■□□□□ 0.93
SNX3-201ENST00000230085 ATG14Q6ZNE5 492 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 HPS6Q86YV9 775 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 RSPH1Q8WYR4 309 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 GFM2Q969S9 779 aaKnown RBP20.88■□□□□ 0.93
SNX3-201ENST00000230085 C18orf25Q96B23 403 aaPredicted RBP20.88■□□□□ 0.93
SNX3-201ENST00000230085 NKX2-4Q9H2Z4 354 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 PNPOQ9NVS9 261 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 THEGQ9P2T0 379 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 RIMS3Q9UJD0 308 aa20.88■□□□□ 0.93
SNX3-201ENST00000230085 PDCD11Q14690 1871 aaKnown RBP20.88■□□□□ 0.93
SNX3-201ENST00000230085 PDE5AO76074 875 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 CLPTM1O96005 669 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 CCDC166P0CW27 439 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 CYP2F1P24903 491 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 DNAJB1P25685 340 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 SERPINB6P35237 376 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 PBX3P40426 434 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 SOX4Q06945 474 aaPredicted RBP20.87■□□□□ 0.93
SNX3-201ENST00000230085 RAB30Q15771 203 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 ZBTB6Q15916 424 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 SPOUT1Q5T280 376 aaKnown RBP20.87■□□□□ 0.93
SNX3-201ENST00000230085 KLC3Q6P597 504 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 CLEC14AQ86T13 490 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 RP9Q8TA86 221 aaKnown RBP20.87■□□□□ 0.93
SNX3-201ENST00000230085 ARNTL2Q8WYA1 636 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 KHSRPQ92945 711 aaKnown RBP eCLIP20.87■□□□□ 0.93
SNX3-201ENST00000230085 FAM193BQ96PV7 902 aaPredicted RBP20.87■□□□□ 0.93
SNX3-201ENST00000230085 ZNF385DQ9H6B1 395 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 GOLGA2P5Q9HBQ8 144 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 HMGXB4Q9UGU5 601 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 MID2Q9UJV3 735 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 ARHGAP10A1A4S6 786 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 KCNA4P22459 653 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 SDC4P31431 198 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 CDH8P55286 799 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 SLC6A3Q01959 620 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 DSC1Q08554 894 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 SPANXN3Q5MJ09 141 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 NT5DC4Q86YG4 428 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 PSTKQ8IV42 348 aaKnown RBP20.87■□□□□ 0.93
SNX3-201ENST00000230085 COLGALT2Q8IYK4 626 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 PAAF1Q9BRP4 392 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 SLC2A11Q9BYW1 496 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 HACD3Q9P035 362 aa20.87■□□□□ 0.93
SNX3-201ENST00000230085 RGSL1A5PLK6 1076 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 CASTOR2A6NHX0 329 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 TOP3BO95985 862 aaKnown RBP20.86■□□□□ 0.93
SNX3-201ENST00000230085 CYP3A5P20815 502 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 TMEM132DQ14C87 1099 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 PIGGQ5H8A4 983 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 OR6B2Q6IFH4 312 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 C16orf46Q6P387 395 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 PHTF2Q8N3S3 785 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 RDH11Q8TC12 318 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 SREK1Q8WXA9 508 aaKnown RBP20.86■□□□□ 0.93
SNX3-201ENST00000230085 CLP1Q92989 425 aaKnown RBP20.86■□□□□ 0.93
SNX3-201ENST00000230085 TMEM216Q9P0N5 145 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 HESX1Q9UBX0 185 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 TUBGCP4Q9UGJ1 667 aa20.86■□□□□ 0.93
SNX3-201ENST00000230085 PRSS51A0A1B0GVH4 220 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 NT5C1B-RDH14C9J2C7 533 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 SOX1O00570 391 aaPredicted RBP20.85■□□□□ 0.93
SNX3-201ENST00000230085 ZBTB14O43829 449 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 MPOP05164 745 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 APOA4P06727 396 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 PSMD8P48556 350 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 SERPINB8P50452 374 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 CSRP3P50461 194 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 HDAC4P56524 1084 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 TUSC3Q13454 348 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 GRAMD1BQ3KR37 738 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 RAB6CQ53S08 254 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 SYCP2LQ5T4T6 812 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 HEATR6Q6AI08 1181 aaKnown RBP20.85■□□□□ 0.93
SNX3-201ENST00000230085 KCNT2Q6UVM3 1135 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 TIFAQ96CG3 184 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 RAB6CQ9H0N0 254 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 COG4Q9H9E3 785 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 SLC28A3Q9HAS3 691 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 SLC38A7Q9NVC3 462 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 HSFX1Q9UBD0 423 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 USP3Q9Y6I4 520 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 KPNA7A9QM74 516 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 TADA2AO75478 443 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 RPL34P49207 117 aaKnown RBP20.85■□□□□ 0.93
SNX3-201ENST00000230085 SLC10A2Q12908 348 aaPredicted RBP20.85■□□□□ 0.93
SNX3-201ENST00000230085 CA9Q16790 459 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 ZNF423Q2M1K9 1284 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 IRAK1BP1Q5VVH5 260 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms