RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 NDOR1Q9UHB4 597 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 GJD2Q9UKL4 321 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 TFR2Q9UP52 801 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 PCDHGC5Q9Y5F6 944 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 STYXL1Q9Y6J8 313 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 DUSP10Q9Y6W6 482 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 URADA6NGE7 173 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 VAPBO95292 243 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 PCNAP12004 261 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 CCNCP24863 283 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 DNAAF5Q86Y56 855 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 HAPLN3Q96S86 360 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 LPIN3Q9BQK8 851 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 RMND5AQ9H871 391 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 ACTR8Q9H981 624 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 PCDH18Q9HCL0 1135 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 TAS2R14Q9NYV8 317 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 WDR27A2RRH5 827 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 MTMR11A4FU01 709 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 FPGTO14772 594 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 PABPC1P11940 636 aaKnown RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 PSMB4P28070 264 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 SERPINB4P48594 390 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 CCNG1P51959 295 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 KCNK10P57789 538 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 POM121L1PQ3SYA9 428 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 ARMC5Q96C12 935 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 MED8Q96G25 268 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 SPATA17Q96L03 361 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 ELAC2Q9BQ52 826 aaKnown RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 ZCWPW1Q9H0M4 648 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 PABPC3Q9H361 631 aaKnown RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 TNPO3Q9Y5L0 923 aaKnown RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 A8MX80 341 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 EVPLLA8MZ36 301 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 SLCO1B7G3V0H7 640 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 ITGAVP06756 1048 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 PEX5P50542 639 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 IL2P60568 153 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 AUHQ13825 339 aaKnown RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 PUS10Q3MIT2 529 aaKnown RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 FAM45BPQ6NSW5 357 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 HDDC3Q8N4P3 179 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 RTL3Q8N8U3 475 aaKnown RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 FAM45AQ8TCE6 357 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 ILKAPQ9H0C8 392 aaPredicted RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 C8orf33Q9H7E9 229 aaPredicted RBP8.09□□□□□ -1.11
NANOG-201ENST00000229307 ACP6Q9NPH0 428 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 CD207Q9UJ71 328 aa8.09□□□□□ -1.11
NANOG-201ENST00000229307 BRCA1P38398 1863 aaKnown RBP8.09□□□□□ -1.12
NANOG-201ENST00000229307 hCG_1818297A0A087WSY0 165 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 IGKV6-21A0A0C4DH24 114 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 MBLAC1A4D2B0 266 aaPredicted RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 E2F6O75461 281 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 CALCAP01258 141 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 TSHRP16473 764 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 TNNI3P19429 210 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 SOAT1P35610 550 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 SKIV2L2P42285 1042 aaKnown RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 WASP42768 502 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 DGKEP52429 567 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 IL10RBQ08334 325 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 MAD2L1Q13257 205 aaPredicted RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 DDX39BQ13838 428 aaKnown RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 NAA25Q14CX7 972 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 SUZ12Q15022 739 aaKnown RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 CRY1Q16526 586 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 UPP1Q16831 310 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 ADGRF1Q5T601 910 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 NEPROQ6NW34 567 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 POTEHQ6S545 545 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 CLEC20AQ6ZU45 233 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 MARK2Q7KZI7 788 aaKnown RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 IRF2BP2Q7Z5L9 587 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 MRPL10Q7Z7H8 261 aaKnown RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 KLHL29Q96CT2 875 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 ERLEC1Q96DZ1 483 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 B3GALT6Q96L58 329 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 ASB2Q96Q27 587 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 BCAS3Q9H6U6 928 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 WDR6Q9NNW5 1121 aaKnown RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 GID8Q9NWU2 228 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 MGAT4DA6NG13 374 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 RGS20O76081 388 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 SLC25A14O95258 325 aaPredicted RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 CSHL1Q14406 222 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 TCEA2Q15560 299 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 TEAD2Q15562 447 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 KBTBD12Q3ZCT8 623 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 WDR45BQ5MNZ6 344 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 HLA-DQA1Q5Y7H0 255 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 RFWD3Q6PCD5 774 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 FBXO38Q6PIJ6 1188 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 VITQ6UXI7 678 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 RBFAQ8N0V3 343 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 C4orf33Q8N1A6 199 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 COPS8Q99627 209 aa8.08□□□□□ -1.12
NANOG-201ENST00000229307 STX18Q9P2W9 335 aaKnown RBP8.08□□□□□ -1.12
NANOG-201ENST00000229307 FBXW11Q9UKB1 542 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms