RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 DNAJB2P25686 324 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 CRABP2P29373 138 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 NME5P56597 212 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 MAP7Q14244 749 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 PTK2BQ14289 1009 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 PKN3Q6P5Z2 889 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 PHTF2Q8N3S3 785 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 LINC01465Q8N7H1 131 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 NXNL1Q96CM4 212 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 OLFM3Q96PB7 478 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 SYT17Q9BSW7 474 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 GLTPD2A6NH11 291 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 HSPA8P11142 646 aaKnown RBP15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 RBBP5Q15291 538 aaKnown RBP15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 GCNAQ96QF7 691 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 VCX3AQ9NNX9 186 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 TBC1D13Q9NVG8 400 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 PPM1HQ9ULR3 514 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 NME7Q9Y5B8 376 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 TFEBP19484 476 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 SOX11P35716 441 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 RENBPP51606 427 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 SPRYD7Q5W111 196 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 AP1ARQ63HQ0 302 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 MAMDC4Q6UXC1 1216 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 SMG8Q8ND04 991 aaKnown RBP15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 OR6Y1Q8NGX8 325 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 ATP6V1E2Q96A05 226 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 S100A14Q9HCY8 104 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 CCDC167Q9P0B6 97 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 VTI1BQ9UEU0 232 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 CRYL1Q9Y2S2 319 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 RGSL1A5PLK6 1076 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 TSPAN8P19075 237 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 RPL9P32969 192 aaKnown RBP15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 NIPAL4Q0D2K0 466 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 LDLRAD1Q5T700 205 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 CEP70Q8NHQ1 597 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 ARNTL2Q8WYA1 636 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 KLHL5Q96PQ7 755 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 LRFN2Q9ULH4 789 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 PFDN6O15212 129 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 SMNDC1O75940 238 aaKnown RBP eCLIP15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 CCDC166P0CW27 439 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 CD86P42081 329 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 WNT3AP56704 352 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 TBX4P57082 545 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 STEAP4Q687X5 459 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 FSTL5Q8N475 847 aaPredicted RBP15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 FBXO32Q969P5 355 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 OR52B2Q96RD2 323 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 TLE6Q9H808 572 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 HEATR9A2RTY3 570 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 PTGESO14684 152 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 DCLK1O15075 740 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 SNNO75324 88 aaPredicted RBP15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 GMNNO75496 209 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 ITGBL1O95965 494 aaPredicted RBP15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 SLC2A3P11169 496 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 ATP6V1B1P15313 513 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 AOC1P19801 751 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 CYP2C18P33260 490 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 CHRNA4P43681 627 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 RAP1GDS1P52306 607 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 CYTH1Q15438 398 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 INTS6LQ5JSJ4 861 aaKnown RBP15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 PCDH20Q8N6Y1 951 aaKnown RBP15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 NPWQ8N729 165 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 SERPINB11Q96P15 392 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 CCDC106Q9BWC9 280 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 PRKD2Q9BZL6 878 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 WDR41Q9HAD4 459 aa15.15■□□□□ 0.02
UBE2D4-201ENST00000222402 LIN7AO14910 233 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 STX5Q13190 355 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 RNF220Q5VTB9 566 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 MYLK4Q86YV6 388 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 CNBD2Q96M20 576 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 ZNF778Q96MU6 729 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 FTHL17Q9BXU8 183 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 ZNFX1Q9P2E3 1918 aaKnown RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 SLC12A8A0AV02 714 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 RBM47A0AV96 593 aaKnown RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 UBDO15205 165 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 FGF10O15520 208 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 PRKAA2P54646 552 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 DPYSQ14117 519 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 TMEM198Q66K66 360 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 FRMD7Q6ZUT3 714 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 IFNEQ86WN2 208 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 ATP6V0D2Q8N8Y2 350 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 SPDYE1Q8NFV5 336 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 COPS7BQ9H9Q2 264 aaPredicted RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 TRPC7Q9HCX4 862 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 MRPL40Q9NQ50 206 aaKnown RBP15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 PADI3Q9ULW8 664 aa15.14■□□□□ 0.01
UBE2D4-201ENST00000222402 AURKCQ9UQB9 309 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms