RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 SIK2Q9H0K1 926 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 ZCWPW1Q9H0M4 648 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 C20orf96Q9NUD7 363 aaPredicted RBP22.53■■□□□ 1.2
CCDC9-201ENST00000221922 NEU3Q9UQ49 428 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 CDY1Q9Y6F8 540 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 FNDC1Q4ZHG4 1894 aaPredicted RBP22.53■■□□□ 1.2
CCDC9-201ENST00000221922 DFFAO00273 331 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 GRIK1P39086 918 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 ERFP50548 548 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 CDC16Q13042 620 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 HNRNPDQ14103 355 aaKnown RBP22.53■■□□□ 1.2
CCDC9-201ENST00000221922 PPP2R5DQ14738 602 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 HSP90AA5PQ58FG0 334 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 FSTL4Q6MZW2 842 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 CLEC14AQ86T13 490 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 MFSD3Q96ES6 412 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 TSC22D3Q99576 134 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 FTHL17Q9BXU8 183 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 PDP2Q9P2J9 529 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 KIF3CO14782 793 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 SMIM24O75264 130 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 PAGE1O75459 146 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 ANXA9O76027 345 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 GMPRP36959 345 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 SMAD1Q15797 465 aaKnown RBP22.52■■□□□ 1.2
CCDC9-201ENST00000221922 VWA5B1Q5TIE3 1220 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 RNF220Q5VTB9 566 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 EPGNQ6UW88 154 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 PLD6Q8N2A8 252 aaKnown RBP22.52■■□□□ 1.2
CCDC9-201ENST00000221922 PHC3Q8NDX5 983 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 JADE3Q92613 823 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 TRAPPC9Q96Q05 1148 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 TBC1D13Q9NVG8 400 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 CDH22Q9UJ99 828 aa22.52■■□□□ 1.2
CCDC9-201ENST00000221922 ENO4A6NNW6 628 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 G3V2L1 256 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 COL6A1P12109 1028 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 CCNIQ14094 377 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 MANEALQ5VSG8 457 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 LHX8Q68G74 356 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 DHDDSQ86SQ9 333 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 DCP1BQ8IZD4 617 aaKnown RBP22.51■■□□□ 1.19
CCDC9-201ENST00000221922 CNTD1Q8N815 330 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 SREK1Q8WXA9 508 aaKnown RBP22.51■■□□□ 1.19
CCDC9-201ENST00000221922 FCRL5Q96RD9 977 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 AGAP2Q99490 1192 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 APOL2Q9BQE5 337 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 KIFC1Q9BW19 673 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 CDH19Q9H159 772 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 GPBP1L1Q9HC44 474 aaPredicted RBP22.51■■□□□ 1.19
CCDC9-201ENST00000221922 CHRAC1Q9NRG0 131 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 ZDHHC7Q9NXF8 308 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 TMEM114B3SHH9 223 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 LYNP07948 512 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 SLC39A12Q504Y0 691 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 METTL21CQ5VZV1 264 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 ARHGAP12Q8IWW6 846 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 TNS4Q8IZW8 715 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 PPP2R3CQ969Q6 453 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 FUBP3Q96I24 572 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCDC9-201ENST00000221922 PGLYRP2Q96PD5 576 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 STARD7Q9NQZ5 370 aa22.51■■□□□ 1.19
CCDC9-201ENST00000221922 GNRH1P01148 92 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 ITGAXP20702 1163 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 NUMBP49757 651 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 FSCBQ5H9T9 825 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 TIGD7Q6NT04 549 aaPredicted RBP22.5■■□□□ 1.19
CCDC9-201ENST00000221922 RNF111Q6ZNA4 994 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 RAPH1Q70E73 1250 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 SCD5Q86SK9 330 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 PHTF2Q8N3S3 785 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 IL12RB2Q99665 862 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 TBL1YQ9BQ87 522 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 MCMBPQ9BTE3 642 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 PPP1R12CQ9BZL4 782 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 COG4Q9H9E3 785 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 SPATS2LQ9NUQ6 558 aaKnown RBP22.5■■□□□ 1.19
CCDC9-201ENST00000221922 UBP1Q9NZI7 540 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 MID2Q9UJV3 735 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 PLXNA3P51805 1871 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 A0A096LPK6 155 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 MATN3O15232 486 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 OR4Q2P0C623 313 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 NCF2P19878 526 aaPredicted RBP22.5■■□□□ 1.19
CCDC9-201ENST00000221922 OR1G1P47890 313 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 NFE2Q16621 373 aaPredicted RBP22.5■■□□□ 1.19
CCDC9-201ENST00000221922 NAPRTQ6XQN6 538 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 OTOP3Q7RTS5 596 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 LRRC49Q8IUZ0 686 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 CCDC117Q8IWD4 279 aaPredicted RBP22.5■■□□□ 1.19
CCDC9-201ENST00000221922 USP33Q8TEY7 942 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 ATXN7L3BQ96GX2 97 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 FCRL2Q96LA5 508 aaPredicted RBP22.5■■□□□ 1.19
CCDC9-201ENST00000221922 GLOD4Q9HC38 313 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 IARS2Q9NSE4 1012 aaKnown RBP22.5■■□□□ 1.19
CCDC9-201ENST00000221922 TMEM161AQ9NX61 479 aa22.5■■□□□ 1.19
CCDC9-201ENST00000221922 SYN3O14994 580 aa22.49■■□□□ 1.19
CCDC9-201ENST00000221922 H2AFYO75367 372 aaKnown RBP22.49■■□□□ 1.19
CCDC9-201ENST00000221922 INHAP05111 366 aa22.49■■□□□ 1.19
CCDC9-201ENST00000221922 TPH1P17752 444 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms