RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ARHGAP26Q9UNA1 814 aa14.84□□□□□ -0.03
CNOT3-201ENST00000221232 C9IYK1 514 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 MGEA5O60502 916 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 THPOP40225 353 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 MAGEA12P43365 314 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 GJA9P57773 515 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 DLG1Q12959 904 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 TAF1CQ15572 869 aaPredicted RBP14.83□□□□□ -0.03
CNOT3-201ENST00000221232 TRIP10Q15642 601 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 UPP1Q16831 310 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 ZNF789Q5FWF6 425 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 SDCCAG8Q86SQ7 713 aaPredicted RBP14.83□□□□□ -0.03
CNOT3-201ENST00000221232 CASP10Q92851 521 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 CDRT15Q96T59 188 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 SIKE1Q9BRV8 207 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 FSD1LQ9BXM9 530 aa14.83□□□□□ -0.03
CNOT3-201ENST00000221232 MAGEB16A2A368 324 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 DLX3O60479 287 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 TSPAN8P19075 237 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 PIK3R1P27986 724 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 PCSK1P29120 753 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 RPL14P50914 215 aaKnown RBP14.83□□□□□ -0.04
CNOT3-201ENST00000221232 FSCBQ5H9T9 825 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 BTBD8Q5XKL5 378 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 SEL1L3Q68CR1 1132 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 ZNF470Q6ECI4 717 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 PKN3Q6P5Z2 889 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 DCLRE1AQ6PJP8 1040 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 TMEM86AQ8N2M4 240 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 TMEM151AQ8N4L1 468 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 C2orf69Q8N8R5 385 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 FAM156AQ8NDB6 213 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 OR6Y1Q8NGX8 325 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 GDPD5Q8WTR4 605 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 KLHL5Q96PQ7 755 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 TUBGCP5Q96RT8 1024 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 BRD8Q9H0E9 1235 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 SLC45A1Q9Y2W3 748 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 FAM95CA0A1B0GW59 222 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 HCAR3P49019 387 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 TAS2R39P59534 338 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 CSHL1Q14406 222 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 GRAMD1BQ3KR37 738 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 TMCO4Q5TGY1 634 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 CENPLQ8N0S6 344 aaPredicted RBP14.83□□□□□ -0.04
CNOT3-201ENST00000221232 FBXW8Q8N3Y1 598 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 ACTRT2Q8TDY3 377 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 ACOT9Q9Y305 439 aa14.83□□□□□ -0.04
CNOT3-201ENST00000221232 MTSS1O43312 755 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 GRID2O43424 1007 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 HLA-DQB2P05538 268 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 SLC1A2P43004 574 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 AQP4P55087 323 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 DBN1Q16643 649 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 PM20D1Q6GTS8 502 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 OR52E8Q6IFG1 317 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 CNSTQ6PJW8 725 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 DHDDSQ86SQ9 333 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 METTL23Q86XA0 190 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 ARHGAP12Q8IWW6 846 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 RCN3Q96D15 328 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 GPR22Q99680 433 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 C1QTNF1Q9BXJ1 281 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 RHOJQ9H4E5 214 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 STN1Q9H668 368 aaKnown RBP14.82□□□□□ -0.04
CNOT3-201ENST00000221232 PRDM16Q9HAZ2 1276 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 GLOD4Q9HC38 313 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 GTSE1Q9NYZ3 720 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 MTF2Q9Y483 593 aaPredicted RBP14.82□□□□□ -0.04
CNOT3-201ENST00000221232 TLL2Q9Y6L7 1015 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 DICER1Q9UPY3 1922 aaKnown RBP14.82□□□□□ -0.04
CNOT3-201ENST00000221232 CCDC189A1A4V9 331 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 MATN2O00339 956 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 BUD23O43709 281 aaKnown RBP14.82□□□□□ -0.04
CNOT3-201ENST00000221232 RNASEH1O60930 286 aaKnown RBP14.82□□□□□ -0.04
CNOT3-201ENST00000221232 GPR15P49685 360 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 GPR162Q16538 588 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 PCID2Q5JVF3 399 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 RBM20Q5T481 1227 aaKnown RBP14.82□□□□□ -0.04
CNOT3-201ENST00000221232 LIPMQ5VYY2 423 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 LRRC8EQ6NSJ5 796 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 PGM2L1Q6PCE3 622 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 GATA6Q92908 595 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 TRPV2Q9Y5S1 764 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 AK5Q9Y6K8 562 aa14.82□□□□□ -0.04
CNOT3-201ENST00000221232 ERI2A8K979 691 aaKnown RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 HDAC3O15379 428 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 CCNT2O60583 730 aaKnown RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 MAFKO60675 156 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 FKBP6O75344 327 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 DDHD2O94830 711 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 LYNP07948 512 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 ALOX15P16050 662 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 STMN1P16949 149 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 ARNTP27540 789 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 PAPOLAP51003 745 aaKnown RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 CSE1LP55060 971 aaKnown RBP14.81□□□□□ -0.04
CNOT3-201ENST00000221232 POLE2P56282 527 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 SLC12A1Q13621 1099 aa14.81□□□□□ -0.04
CNOT3-201ENST00000221232 DENND5AQ6IQ26 1287 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms