RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 IFI35P80217 286 aaPredicted RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 CYP1B1Q16678 543 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 TNFAIP8L3Q5GJ75 292 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 GLRA4Q5JXX5 417 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 NOP9Q86U38 636 aaKnown RBP4.47□□□□□ -1.69
CHD9-201ENST00000219084 PPP1R16BQ96T49 567 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 CDRT15Q96T59 188 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ZBED2Q9BTP6 218 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 POMKQ9H5K3 350 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 BLOC1S4Q9NUP1 217 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 INVSQ9Y283 1065 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 ITM2BQ9Y287 266 aa4.47□□□□□ -1.69
CHD9-201ENST00000219084 DHRS12A0PJE2 317 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 KLRC4O43908 158 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 SIN3BO75182 1162 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 FGF1P05230 155 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 GUCA1AP43080 201 aaPredicted RBP4.46□□□□□ -1.69
CHD9-201ENST00000219084 GPR15P49685 360 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 GRIK3Q13003 919 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 TCEA2Q15560 299 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 MAPK11Q15759 364 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 PGS1Q32NB8 556 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 USP39Q53GS9 565 aaKnown RBP4.46□□□□□ -1.69
CHD9-201ENST00000219084 RBM20Q5T481 1227 aaKnown RBP4.46□□□□□ -1.69
CHD9-201ENST00000219084 RSBN1Q5VWQ0 802 aaPredicted RBP4.46□□□□□ -1.69
CHD9-201ENST00000219084 PLPPR4Q7Z2D5 763 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 DSG4Q86SJ6 1040 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 UBA3Q8TBC4 463 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 ITCHQ96J02 903 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 TEFMQ96QE5 360 aaKnown RBP4.46□□□□□ -1.69
CHD9-201ENST00000219084 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.46□□□□□ -1.69
CHD9-201ENST00000219084 IL17RBQ9NRM6 502 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 OPTCQ9UBM4 332 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 ST3GAL5Q9UNP4 418 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 CRYL1Q9Y2S2 319 aa4.46□□□□□ -1.69
CHD9-201ENST00000219084 hCG_1818297A0A087WSY0 165 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 C1orf232A0A0U1RR37 186 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SMIM22K7EJ46 135 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 CXCL11O14625 94 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 EDF1O60869 148 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 ASS1P00966 412 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 CLTBP09497 229 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 HNMTP50135 292 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 MTTPP55157 894 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 NUMA1Q14980 2115 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TMEM44Q2T9K0 475 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ZNF470Q6ECI4 717 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 USP45Q70EL2 814 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 DDX53Q86TM3 631 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 CLVS1Q8IUQ0 354 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 PGAM4Q8N0Y7 254 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TSEN2Q8NCE0 465 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 RNFT2Q96EX2 444 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PNMA5Q96PV4 448 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 NUAK2Q9H093 628 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 RACGAP1Q9H0H5 632 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ACTR8Q9H981 624 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 NUDT5Q9UKK9 219 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 VPS4AQ9UN37 437 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ERGIC3Q9Y282 383 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 AKAP11Q9UKA4 1901 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 F5H423 210 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 TAF4O00268 1085 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 DCXO43602 365 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 CABYRO75952 493 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TSPAN19P0C672 248 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 MIPP30301 263 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 AVPR1AP37288 418 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 GSTM5P46439 218 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 EPHB3P54753 998 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 BRMS1LQ5PSV4 323 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 RETSATQ6NUM9 610 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 STRADAQ7RTN6 431 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 AKAP14Q86UN6 197 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SNX32Q86XE0 403 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 LRRC52Q8N7C0 313 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 HM13Q8TCT9 377 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SYTL5Q8TDW5 730 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 WNT8BQ93098 351 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 CDH19Q9H159 772 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 DNAAF2Q9NVR5 837 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 CHORDC1Q9UHD1 332 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 HACL1Q9UJ83 578 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TNFSF13BQ9Y275 285 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 LRIG2O94898 1065 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 FGF19O95750 216 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 IGSF6O95976 241 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 LRG1P02750 347 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PAX7P23759 505 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ADRA1DP25100 572 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 FAUP35544 74 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 CAPZA2P47755 286 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TKTL1P51854 596 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 CASP5P51878 434 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 AP3S2P59780 193 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ADIGQ0VDE8 80 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 NR1D2Q14995 579 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ZNF618Q5T7W0 954 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 HS6ST3Q8IZP7 471 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms