RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 KRT78Q8N1N4 520 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 LGMNQ99538 433 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 NDE1Q9NXR1 346 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 F2P00734 622 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 CD151P48509 253 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 GSSP48637 474 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 ZNF135P52742 658 aaPredicted RBP13.92□□□□□ -0.18
SIX4-201ENST00000216513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.92□□□□□ -0.18
SIX4-201ENST00000216513 ST13P4Q8IZP2 240 aaPredicted RBP13.92□□□□□ -0.18
SIX4-201ENST00000216513 C1orf127Q8N9H9 656 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 PIGKQ92643 395 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 PLEKHA8Q96JA3 519 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 CDV3Q9UKY7 258 aaKnown RBP13.92□□□□□ -0.18
SIX4-201ENST00000216513 FOXP2O15409 715 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 OR10H2O60403 315 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 PRMT3O60678 531 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 TFE3P19532 575 aaPredicted RBP13.91□□□□□ -0.18
SIX4-201ENST00000216513 CRADDP78560 199 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 ESRP1Q6NXG1 681 aaKnown RBP13.91□□□□□ -0.18
SIX4-201ENST00000216513 KCNMB4Q86W47 210 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 EFCAB3Q8N7B9 438 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 CNBD2Q96M20 576 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 FRMD8Q9BZ67 464 aaPredicted RBP13.91□□□□□ -0.18
SIX4-201ENST00000216513 LINC00854A0A1B0GVQ3 168 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 SIGLEC16A6NMB1 481 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 FTH1P02794 183 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 GRM3Q14832 879 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 NRDE2Q9H7Z3 1164 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 KLC4Q9NSK0 619 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 H0Y858 1186 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 ZNF143P52747 638 aaPredicted RBP13.91□□□□□ -0.18
SIX4-201ENST00000216513 PLOD1Q02809 727 aaPredicted RBP13.91□□□□□ -0.18
SIX4-201ENST00000216513 MMAAQ8IVH4 418 aaKnown RBP13.91□□□□□ -0.18
SIX4-201ENST00000216513 LRRC34Q8IZ02 419 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 ZNF366Q8N895 744 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 PHF21BQ96EK2 531 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 HAO1Q9UJM8 370 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 KRT87PA6NCN2 255 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 LMNAP02545 664 aaKnown RBP13.91□□□□□ -0.18
SIX4-201ENST00000216513 MAPK1P28482 360 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 RBL1P28749 1068 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 ALDH4A1P30038 563 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 GJA5P36382 358 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 AP2B1P63010 937 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 MFSD7Q6UXD7 560 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 CCNJLQ8IV13 435 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 DEFB123Q8N688 67 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 TSC22D3Q99576 134 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 ACAT2Q9BWD1 397 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 NDEL1Q9GZM8 345 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 CD207Q9UJ71 328 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 GNPTGQ9UJJ9 305 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 ZSCAN5DPP0CG00 497 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 MAGEA9P43362 315 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 VCPIP1Q96JH7 1222 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 ZDHHC4Q9NPG8 344 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 PLAGL2Q9UPG8 496 aa13.91□□□□□ -0.18
SIX4-201ENST00000216513 RASSF10A6NK89 507 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 HS6ST1O60243 411 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
SIX4-201ENST00000216513 PSMB4P28070 264 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 ZACNQ401N2 412 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 BRMS1LQ5PSV4 323 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 C4BP0C0L5 1744 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 COL1A1P02452 1464 aaPredicted RBP13.9□□□□□ -0.18
SIX4-201ENST00000216513 PYGBP11216 843 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 RAVER1Q8IY67 606 aaKnown RBP13.9□□□□□ -0.18
SIX4-201ENST00000216513 PRKD2Q9BZL6 878 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 EPN3Q9H201 632 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 B4DGG1 531 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 SOD2P04179 222 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 CDH3P22223 829 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 RPIAP49247 311 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 SPIDRQ14159 915 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 RINLQ6ZS11 566 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 FAM129CQ86XR2 697 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 ARID3BQ8IVW6 561 aaPredicted RBP13.9□□□□□ -0.18
SIX4-201ENST00000216513 DNAJC19Q96DA6 116 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 ACSS2Q9NR19 701 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 AK5Q9Y6K8 562 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 WDR45BQ5MNZ6 344 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 TPRG1Q6ZUI0 275 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 E2F7Q96AV8 911 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 PLD4Q96BZ4 506 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 SPATS2LQ9NUQ6 558 aaKnown RBP13.9□□□□□ -0.18
SIX4-201ENST00000216513 TAS2R14Q9NYV8 317 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 HACD1B0YJ81 288 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 B2RBV5 119 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 NFKB1P19838 968 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 LSP1P33241 339 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 MMRN1Q13201 1228 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 CCDC81Q6ZN84 652 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 SCAMP5Q8TAC9 235 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 TDP1Q9NUW8 608 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 ARHGAP20Q9P2F6 1191 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 CHKBQ9Y259 395 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 STXBP5LQ9Y2K9 1186 aa13.9□□□□□ -0.18
SIX4-201ENST00000216513 MORC2Q9Y6X9 1032 aaPredicted RBP13.9□□□□□ -0.18
SIX4-201ENST00000216513 IGLV3-22A0A075B6J6 115 aa13.89□□□□□ -0.19
SIX4-201ENST00000216513 PPP1R37O75864 691 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms