RNA–Protein interactions for RNA: ENSMUST00000202769.1

Trim54-202, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Trim54, Length 1,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-202ENSMUST00000202769 Ttc16Q8C1F5 767 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Kdm1bQ8CIG3 826 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Fbxw7Q8VBV4 629 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Olfr1176Q8VG40 315 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Spns2Q91VM4 549 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Mis12Q9CY25 206 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Slc25a19Q9DAM5 318 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Prl2a1Q9JHK0 228 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Gprc5dQ9JIL6 344 aa16.72■□□□□ 0.27
Trim54-202ENSMUST00000202769 Gm14459A2BI73 179 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 DgkiD3YWQ0 1071 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Tekt5G5E8A8 557 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Cpsf2O35218 782 aaKnown RBP16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 ZfrO88532 1074 aaKnown RBP16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Rasgrf1P27671 1262 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Smpdl3bP58242 456 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Neurog2P70447 263 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Tcp11Q01755 566 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Spout1Q3UHX9 385 aaKnown RBP16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 StilQ60988 1262 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Bpifb1Q61114 474 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Igsf3Q6ZQA6 1194 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 SrlQ7TQ48 910 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Lrrc27Q80YS5 523 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Cdkn3Q810P3 211 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Olfml1Q8BSH2 233 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Trub1Q8C0D0 338 aaKnown RBP16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Fermt3Q8K1B8 665 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Eif3cQ8R1B4 911 aaKnown RBP16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Rpn2Q9DBG6 631 aaKnown RBP16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Cpne8Q9DC53 577 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Csnk1eQ9JMK2 416 aaKnown RBP16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Mnx1Q9QZW9 404 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Gria4Q9Z2W8 902 aa16.71■□□□□ 0.27
Trim54-202ENSMUST00000202769 Cnot1Q6ZQ08 2375 aaKnown RBP16.71■□□□□ 0.26
Trim54-202ENSMUST00000202769 BC034090A0A087WP46 1202 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Cilp2D3Z7H8 1162 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Gm8994E9PV04 411 aaKnown RBP16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Pabpc4lG5E8X2 370 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 A630095N17RikJ3KMM7 116 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Gp1baO35930 734 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Bmp6P20722 510 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Htr2cP34968 459 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Arl4aP61213 200 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Snrpd1P62315 119 aaKnown RBP16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Ccdc117Q6PB51 277 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Fnbp1Q80TY0 616 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Spata4Q8K3V1 295 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Dusp19Q8K4T5 220 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Pcdhb6Q91XZ4 772 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Arfgap2Q99K28 520 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Ipo7Q9EPL8 1038 aaKnown RBP16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Gm3173A6NAS3 172 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Ddx43D3Z6P9 646 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Srp54bE9PXC0 504 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Gm3594E9Q2A7 267 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Zfp277E9Q6D6 583 aaKnown RBP16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Olfr694K7N641 315 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 PurbO35295 324 aaKnown RBP16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Dnajb5O89114 348 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Rack1P68040 317 aaKnown RBP16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Col6a2Q02788 1034 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Cfap157Q0VFX2 523 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Slc38a5Q3U1J0 479 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Trmt10cQ3UFY8 414 aaKnown RBP16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Krt35Q497I4 455 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Zfp36l3Q5ISE2 725 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Pon2Q62086 354 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Sin3bQ62141 1098 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Fcrl5Q68SN8 596 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Pced1bQ8BGX1 433 aaKnown RBP16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Hus1Q8BQY8 280 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Nup58Q8R332 587 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Camk1Q91YS8 374 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Mrpl17Q9D8P4 176 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Mmel1Q9JLI3 765 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 RhoaQ9QUI0 193 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Rad1Q9QWZ1 280 aa16.7■□□□□ 0.26
Trim54-202ENSMUST00000202769 Lipo2D3YY49 398 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Gm6205E9PZS2 359 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Foxn2E9Q7L6 429 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 F6Y6L6 278 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 BC024978J3QPC3 361 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Vmn2r88L7N1W8 857 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Gcm2O09102 504 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Grk4O70291 574 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Csf2rb2P26954 878 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 PorP37040 678 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 ErgP81270 486 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Prss57Q14B24 284 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Mat2aQ3THS6 395 aaKnown RBP16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 4930438A08RikQ5SPH3 536 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Fbxw2Q60584 422 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Znf185Q62394 352 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Dclk2Q6PGN3 756 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 TdrkhQ80VL1 560 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Rnf187Q8BFX1 236 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Gm6367Q8C6L9 287 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Rsad2Q8CBB9 362 aa16.69■□□□□ 0.26
Trim54-202ENSMUST00000202769 Btbd6Q8K2J9 488 aa16.69■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms