RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Lyrm1Q9CQB7 122 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Stau1Q9Z108 487 aaKnown RBP11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 0610012G03RikA0A0J9YTR2 95 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Sdccag3A2AIW0 432 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 1700064H15RikD3Z4D4 81 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Dusp8O09112 663 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 PrkcdP28867 674 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 MafbP54841 323 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Mc4rP56450 332 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Nploc4P60670 608 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Gata5P97489 404 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Ddr1Q03146 911 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Slc9b2Q5BKR2 547 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Rnf145Q5SWK7 663 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Egfl8Q6GUQ1 293 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Snx15Q91WE1 337 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Oas1cQ924S2 362 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Rex1bdQ9CYZ6 169 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Psma4Q9R1P0 261 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Ercc2O08811 760 aaKnown RBP11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 PrnpP04925 254 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 McuQ3UMR5 350 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Q8BHN7 327 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Znf473Q8BI67 892 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Fbxo38Q8BMI0 1194 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 4932414N04RikQ8CEQ9 752 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 LzicQ8K3C3 190 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 NlnQ91YP2 704 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 PrccQ9EQC8 491 aaKnown RBP11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Mta2Q9R190 668 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 NfkbiaQ9Z1E3 314 aa11.29□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Lamb1P02469 1786 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Zfp457L7N1X4 647 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Has3O08650 554 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 CkmP07310 381 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Rpl36P47964 105 aaKnown RBP11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Adamts10P58459 1104 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 YwhaqP68254 245 aaKnown RBP11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Irf3P70671 419 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Dab1P97318 588 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Tarbp2P97473 365 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Nt5dc3Q3UHB1 546 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Ctc1Q5SUQ9 1212 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Runx1t1Q61909 577 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Usp7Q6A4J8 1103 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Tyw3Q8BSA9 257 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Kctd12bQ8C7J6 292 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 N4bp2l2Q8JZS6 575 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 OlahQ8R197 265 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Aim2Q91VJ1 354 aaKnown RBP11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Commd8Q9CZG3 183 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Borcs5Q9D920 195 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Dpysl5Q9EQF6 564 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Trpm5Q9JJH7 1158 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Zfp985A2A7A5 519 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Znf711A2ANX9 761 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Cyp2b13A6H6J2 491 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Gbp11A9YVJ5 442 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Cylc2B1AWN8 422 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Gm4907B1AXB9 411 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Vmn2r19G5E8G4 854 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Slc1a6O35544 561 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Stra6O70491 670 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Cep295nlQ497N6 533 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Galnt10Q6P9S7 603 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Clic5Q8BXK9 251 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Slc15a5Q8CBB2 566 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Q8CC96 669 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Eif3lQ8QZY1 564 aaKnown RBP11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Olfr1414Q8VGU5 312 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Ankrd54Q91WK7 299 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 TcimQ9D915 106 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Vwa7Q9JHA8 891 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Ifi213D3Z5G0 586 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 AunipE9Q6Z5 340 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 H2-Eb1P04230 264 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Dpep1P31428 410 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Pcbp1P60335 356 aaKnown RBP11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Arf4P61750 180 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Stt3bQ3TDQ1 823 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Nat9Q3UG98 241 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Tnfaip2Q61333 691 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Ifi44Q8BV66 422 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Clec1aQ8BWY2 269 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Anapc2Q8BZQ7 837 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Dis3lQ8C0S1 1053 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Bhlhe22Q8C6A8 355 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Spdye4bQ8CDE8 236 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Snapc1Q8K0S9 389 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Sgsm3Q8VCZ6 750 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Atg13Q91YI1 516 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 FopnlQ9CZS3 174 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Ndc80Q9D0F1 642 aaKnown RBP11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Nxnl2Q9D531 156 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 2010005H15RikQ9D8D6 97 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Mgea5Q9EQQ9 916 aa11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Rbbp6P97868 1790 aaKnown RBP11.28□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Zfp882E9Q4R4 555 aa11.27□□□□□ -0.6
Col20a1-201ENSMUST00000108856 ClockO08785 855 aa11.27□□□□□ -0.6
Col20a1-201ENSMUST00000108856 Impa1O55023 277 aa11.27□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 41.5 ms