RNA–Protein interactions for RNA: ENSMUST00000094646.5

Vps4b-201, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,633 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-201ENSMUST00000094646 Tbc1d10aP58802 500 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Msx2Q03358 267 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Cyb5d1Q5NCY3 228 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 HnrnpdQ60668 355 aaKnown RBP13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gpat3Q8C0N2 438 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Mtrf1Q8K126 446 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ergic2Q9CR89 377 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Atp6ap2Q9CYN9 350 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Kctd4Q9D7X1 259 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 1700018B08RikQ9DA83 213 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Kcnq4Q9JK97 696 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Znhit2Q9QY66 399 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Katna1Q9WV86 491 aa13.04□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gm8369E9PZI3 166 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Pias1O88907 651 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 H2-AaP01910 256 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Aldh1a1P24549 501 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 PamP97467 979 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ecm1Q61508 559 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Btnl1Q7TST0 509 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Orai2Q8BH10 250 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Mark4Q8CIP4 752 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ggt7Q99JP7 662 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ssxb1Q9CPU1 170 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gsdmdc1Q9D8T2 487 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 4931406B18RikA2RSL7 367 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Xpnpep3B7ZMP1 506 aaKnown RBP13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gm21293E9Q4G9 266 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Sypl2O89104 264 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 AprtP08030 180 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Timm13P62075 95 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Slc20a1Q61609 681 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Dennd1cQ8CFK6 786 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Setd7Q8VHL1 366 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 DeraQ91YP3 318 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Rmnd5bQ91YQ7 393 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Trappc5Q9CQA1 188 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ddx43D3Z6P9 646 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Pitpnm1O35954 1243 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 PargO88622 969 aaKnown RBP13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Atp5bP56480 529 aaKnown RBP13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Shcbp1lQ3TTP0 639 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Slc17a7Q3TXX4 560 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ssx9Q6XAS3 170 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Atp2c1Q80XR2 918 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Sfr1Q8BP27 319 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Slc18a2Q8BRU6 517 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Trim14Q8BVW3 440 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Evi2bQ8VD58 444 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Commd8Q9CZG3 183 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Hes6Q9JHE6 224 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Trpc4apQ9JLV2 797 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Piwil1Q9JMB7 862 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Hey2Q9QUS4 339 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Racgap1Q9WVM1 628 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Mtx3D3YTP3 312 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gm2956E9PVJ0 216 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gm8108K7N734 216 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gm3739L7N296 216 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gm3164L7N2B9 238 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gm3488M0QW81 238 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Dok6Q2MHE5 331 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Olfr169Q7TS53 313 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ndfip2Q91ZP6 311 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 PawrQ925B0 333 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Reep3Q99KK1 254 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Pak1ip1Q9DCE5 382 aaKnown RBP13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Robo1O89026 1612 aa13.03□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ptchd4B9EKX1 904 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 S100a6P14069 89 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gabrb2P63137 512 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Klhl23Q6GQU2 558 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 GnasQ6R0H7 1133 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Ubap1Q8BH48 502 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Chst12Q99LL3 419 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Spg21Q9CQC8 308 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Tmed10Q9D1D4 219 aaKnown RBP13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Tmem68Q9D850 329 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Hsd3b7Q9EQC1 369 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Lima1Q9ERG0 753 aaKnown RBP13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Gria4Q9Z2W8 902 aa13.02□□□□□ -0.32
Vps4b-201ENSMUST00000094646 Smok3cA0A087WSF2 504 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Mrgpra2aA0A0R4J1Z0 331 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Btnl4A2CG29 586 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Kpna3O35344 521 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 LtfP08071 707 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Bmp2P21274 394 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Resp18P47939 175 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Cyp2c38P56655 490 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Pfkfb2P70265 519 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Sel1l2Q3V172 688 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Klra8Q60682 266 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Papss1Q60967 624 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Mef2dQ63943 514 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Larp4bQ6A0A2 741 aaKnown RBP13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Tnpo3Q6P2B1 923 aaKnown RBP13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Lrrc24Q8BHA1 521 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 B3glctQ8BHT6 489 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Slc9a4Q8BUE1 797 aa13.02□□□□□ -0.33
Vps4b-201ENSMUST00000094646 Fnbp1lQ8K012 605 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 20.6 ms