RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Gcom1E9PZ54 550 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Serpine3E9Q6A2 401 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Prdm15E9Q8T2 1174 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm5689F6Y2A6 97 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Pabpc4lG5E8X2 370 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Fgf10O35565 209 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gp1baO35930 734 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gpr27O54897 379 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gdap1O88741 358 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Zmym1Q3TJB1 983 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Fam8a1Q3URQ4 399 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Zfp235Q499D5 702 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tbccd1Q640P7 552 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Naaladl1Q7M758 745 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tmc6Q7TN60 810 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Fnip2Q80TD3 1108 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Fam110bQ8C739 366 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Setd7Q8VHL1 366 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Ddx1Q91VR5 740 aaKnown RBP12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Mtfr1Q99MB2 328 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Bcl7aQ9CXE2 210 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Klhl35Q9CZ49 574 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Lrrc57Q9D1G5 239 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Trpv4Q9EPK8 871 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Tlr9Q9EQU3 1032 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Ccdc86Q9JJ89 426 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Stk11Q9WTK7 436 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Map3k6Q9WTR2 1291 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Psma7Q9Z2U0 248 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gria4Q9Z2W8 902 aa12.35□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 D3Ertd254eA0A0G2JEM5 796 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm13101A2ASJ0 481 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Adam34A2RSG8 714 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Lipo2D3YY49 398 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Zc3h12bG3X9I7 835 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Vmn2r86G5E8Y4 848 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 BC024978J3QPC3 361 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Ebf2O08792 575 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Glb1P23780 647 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Serpina3cP29621 417 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Htr2cP34968 459 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Wee1P47810 646 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Cul4aQ3TCH7 759 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Trmt10cQ3UFY8 414 aaKnown RBP12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Krt35Q497I4 455 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Cep295nlQ497N6 533 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm527Q4KL13 310 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Orc2Q60862 576 aaKnown RBP12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 StilQ60988 1262 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Dpysl3Q62188 570 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Cep70Q6IQY5 616 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Snd1Q78PY7 910 aaKnown RBP12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Llgl1Q80Y17 1036 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Hpcal4Q8BGZ1 191 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Stau2Q8CJ67 570 aaKnown RBP12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Osbpl1aQ91XL9 950 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Thg1lQ9CY52 298 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Rmdn1Q9DCV4 305 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Fstl3Q9EQC7 256 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 MkksQ9JI70 570 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Slfn2Q9Z0I6 378 aa12.34□□□□□ -0.43
Ccdc28a-202ENSMUST00000080860 Gm14781A2A9Q9 366 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm8994E9PV04 411 aaKnown RBP12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gm7073E9QAS1 335 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Cd151O35566 253 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 DffaO54786 331 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 H2-Q8P14430 326 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Rasgrf1P27671 1262 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nckap1P28660 1128 aaKnown RBP12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Slc1a1P51906 523 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Rack1P68040 317 aaKnown RBP12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Tie1Q06806 1134 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mageb5Q14AN0 366 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Nell1Q2VWQ2 810 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Slc38a5Q3U1J0 479 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Mrps31Q61733 384 aaKnown RBP12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 MafkQ61827 156 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Atg16l2Q6KAU8 623 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Znf513Q6PD29 541 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Olfml1Q8BSH2 233 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 C1raQ8CG16 707 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Txndc11Q8K2W3 948 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Irak3Q8K4B2 609 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 ClmpQ8R373 373 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Olfr1176Q8VG40 315 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Olfr1019Q8VGS3 310 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Atpaf2Q91YY4 289 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Gtpbp3Q923K4 492 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Spz1Q99MY0 378 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Slc26a5Q99NH7 744 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 PigkQ9CXY9 395 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Exoc2Q9D4H1 924 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Aldh7a1Q9DBF1 539 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Cpne8Q9DC53 577 aa12.33□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Fer1l4A3KGK3 1992 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Tldc2A2ACG1 198 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Cilp2D3Z7H8 1162 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Zfp715G3X9T1 886 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Slc32a1O35633 525 aa12.32□□□□□ -0.44
Ccdc28a-202ENSMUST00000080860 Per2O54943 1257 aa12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms