RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Dpp9Q8BVG4 862 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Atg14Q8CDJ3 492 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 BsndQ8VIM4 307 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Hkdc1Q91W97 915 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pbld2Q9CXN7 288 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zfp655Q9CZP3 541 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ten1Q9D7K2 161 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 IcmtQ9EQK7 283 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 MkksQ9JI70 570 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cdkl2Q9QUK0 568 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Kmt2eQ3UG20 1868 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Trip11E9Q512 1976 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Kcng2F7A6P6 480 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Krt1P04104 637 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 ItgavP43406 1044 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Bop1P97452 732 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 CamkvQ3UHL1 512 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Afg1lQ3V384 480 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rap1gap2Q5SVL6 712 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr464Q5SW48 313 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 CapslQ6P8Y1 208 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Lca5lQ8C0X0 741 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rdh13Q8CEE7 334 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 BfarQ8R079 450 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Evi2bQ8VD58 444 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cyp2c70Q91W64 489 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 TtpalQ9D3D0 343 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rnft1Q9DCN7 395 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm3147A0A0J9YU88 481 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm10424A0A0J9YVD0 481 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cntnap3E9PY62 1287 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vmn2r14E9Q759 848 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm10719E9Q7T3 227 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm7971J3QMM8 481 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr603L7N1Y4 312 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Traf2P39429 501 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Slc11a2P49282 568 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PhexP70669 749 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PgrQ00175 926 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Aarsd1Q3THG9 412 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Sort1Q6PHU5 825 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Arrdc3Q7TPQ9 414 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pqlc1Q80XM9 271 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Thoc5Q8BKT7 683 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gtf3c4Q8BMQ2 817 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ifi205aQ8CGE8 404 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vps50Q8CI71 964 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Fubp1Q91WJ8 651 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 GatbQ99JT1 557 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Dmap1Q9JI44 468 aa9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Celf2Q9Z0H4 508 aaKnown RBP9.85□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Polr2aP08775 1970 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zfp985A2A7A5 519 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr1023A2ASU6 311 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 UprtB1AVZ0 310 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 FancfE9Q5Z5 343 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 1700122O11RikJ3QPW6 241 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ptpn9O35239 593 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 H2-Eb1P04230 264 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Il6raP22272 460 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 TubP50586 505 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Stt3bQ3TDQ1 823 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Zc3h15Q3TIV5 426 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Mfsd3Q5U419 412 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Wbp4Q61048 376 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Lcp1Q61233 627 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Hspa1aQ61696 641 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Pnma8aQ80VM8 430 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Lrrc8dQ8BGR2 859 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Trim14Q8BVW3 440 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ankrd49Q8VE42 238 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr532Q8VGT4 309 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vps11Q91W86 941 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Reep3Q99KK1 254 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Agpat3Q9D517 376 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 LrgukQ9D5S7 820 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ddx21Q9JIK5 851 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 ClcnkbQ9WUB6 687 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Cpxm1Q9Z100 722 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gucy2dA0A0U1RPR8 1117 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Veph1A1A535 833 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm10406A6NAS4 205 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm3373A6NAS7 205 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Vmn2r84D3YWE3 849 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Kctd18E0CZ26 429 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm3252E9PUT9 216 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm3002E9PW72 216 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm3298E9PW80 205 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Erich1E9PY43 332 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm3468E9QAJ8 216 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Znf683I7HJS4 458 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm3667K7N757 205 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Atp6v0d1P51863 351 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Ptpn5P54830 541 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Gm3558Q5FWC9 205 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Khdrbs1Q60749 443 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Rbbp7Q60973 425 aaKnown RBP9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 PtprrQ62132 656 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Nqo1Q64669 274 aa9.84□□□□□ -0.83
Pcdh1-201ENSMUST00000057185 Olfr299Q7TS05 330 aa9.84□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms