RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ptprn2P80560 1001 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Q3V0E1 1183 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Afap1l2Q5DTU0 825 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mfsd3Q5U419 412 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Phc1Q64028 1012 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Bfsp2Q6NVD9 416 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ppp2r2aQ6P1F6 447 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr26Q7TRB7 308 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Q80WR5 230 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fstl5Q8BFR2 847 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Slc39a13Q8BZH0 361 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Arhgap12Q8C0D4 838 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 4931406P16RikQ8C5X1 1059 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nlrp10Q8CCN1 673 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Acad10Q8K370 1069 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 MfrpQ8K480 584 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Abhd8Q8R0P8 439 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Pglyrp2Q8VCS0 530 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Adam33Q923W9 797 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ovca2Q9D7E3 225 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr933Q9EQA0 308 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Noa1Q9JJG9 693 aaKnown RBP8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Prrg1A2BFE8 218 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sept7O55131 436 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fpr-rs3O88537 343 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 RargP18911 458 aaKnown RBP8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 CskP41241 450 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mapkapk2P49138 386 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sap25Q1EHW4 186 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ccdc110Q3V125 848 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rap1gap2Q5SVL6 712 aaKnown RBP8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Runx3Q64131 409 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cdc14bQ6PFY9 485 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr1080Q7TR67 313 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tbc1d17Q8BYH7 645 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Art3Q8R2G4 371 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Smyd2Q8R5A0 433 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cadm1Q8R5M8 456 aaKnown RBP8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr615Q8VGY4 313 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rsph1Q8VIG3 301 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Eif3hQ91WK2 352 aaKnown RBP8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Usp11Q99K46 921 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Zmynd10Q99ML0 440 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cyp4f13Q99N19 523 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 4930578G10RikQ9D4Q4 153 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Plscr2Q9DCW2 307 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Spry1Q9QXV9 313 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Igkv10-94A0A075B5L1 115 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ttc23lA6H6E9 458 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr611K7N609 323 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr612L7N462 323 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 NmbrO54799 390 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mybpc3O70468 1270 aaKnown RBP8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 PargO88622 969 aaKnown RBP8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tlx1P43345 332 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Slc16a1P53986 493 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Prickle1Q3U5C7 832 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ppp1r13lQ5I1X5 824 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gbp4Q61107 620 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 ScapQ6GQT6 1276 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Spata24Q6P926 205 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Naif1Q6PFD7 327 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Otop2Q80SX5 563 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Wbp1lQ8BGW2 348 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cnot10Q8BH15 744 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Frmd4aQ8BIE6 1020 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Scara3Q8C850 606 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 GrpQ8R1I2 146 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rps6kl1Q8R2S1 544 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nxnl1Q8VC33 217 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Retreg3Q9CQV4 466 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ska2Q9CR46 120 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fcf1Q9CTH6 198 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 S100pbpQ9D5K4 396 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Dgcr8Q9EQM6 773 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cldn19Q9ET38 224 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Clec4aQ9QZ15 238 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 PygmQ9WUB3 842 aaKnown RBP8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Dhx35A2ACQ1 703 aaKnown RBP8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Vmn2r59E9PUT5 865 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Vmn2r86G5E8Y4 848 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Kcnj2P35561 428 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Ybx1P62960 322 aaKnown RBP8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Stmn4P63042 189 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Fam47cQ14BE7 430 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Ankmy2Q3TPE9 440 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Krt26Q3TRJ4 462 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Slc17a7Q3TXX4 560 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Prkaa1Q5EG47 559 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 HnrnpdQ60668 355 aaKnown RBP8.83□□□□□ -1
Trim39-201ENSMUST00000042717 ThrspQ62264 150 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Arl13bQ640N2 427 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Tpp2Q64514 1262 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Fam120bQ6RI63 786 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 SnphQ80U23 495 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Srrm3Q80WV7 648 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 RbsnQ80Y56 783 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Spon2Q8BMS2 330 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 RalylQ8BTF8 293 aa8.83□□□□□ -1
Trim39-201ENSMUST00000042717 Ubr7Q8BU04 425 aa8.83□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms