RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Ropn1Q9ESG2 212 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Smpd3Q9JJY3 655 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gpc1Q9QZF2 557 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 IkbkeQ9R0T8 717 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kcnt2D3Z649 1135 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kctd18E0CZ26 429 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 DgkdE9PUQ8 1220 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cxcr3O88410 367 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mtnd2P03893 345 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kcnj2P35561 428 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 BtrcQ3ULA2 605 aaKnown RBP9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mapkapk3Q3UMW7 384 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ppp1r14bQ62084 147 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Pex26Q8BGI5 305 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gsdmc3Q8CB12 480 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cfap61Q8CEL2 1252 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Olfr449Q8VGW8 311 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Decr1Q9CQ62 335 aaKnown RBP9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Olfr706Q9EPF8 316 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Plod3Q9R0E1 741 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 Scgb2b12S4R2L0 112 aa9.95□□□□□ -0.82
Syne1-201ENSMUST00000041639 TpteG5E8H5 664 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Dcpp3L7N259 170 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Spink5Q148R4 1017 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Snx8Q8CFD4 459 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 CarfQ8VHI4 689 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kdm4bQ91VY5 1086 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Me2Q99KE1 589 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 PigxQ99LV7 254 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ddx28Q9CWT6 540 aaKnown RBP9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mxra8Q9DBV4 442 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Syvn1Q9DBY1 612 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kcnq4Q9JK97 696 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ttll6A4Q9E8 822 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Lpcat1Q3TFD2 534 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Clec12aQ504P2 267 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Larp4bQ6A0A2 741 aaKnown RBP9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Slc18a2Q8BRU6 517 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Plcl2Q8K394 1128 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 BsndQ8VIM4 307 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mrgpra2Q91WW4 305 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Scd3Q99PL7 359 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cnga3Q9JJZ8 631 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 TfgQ9Z1A1 397 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Epb41l1Q9Z2H5 879 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tsc22d3Q9Z2S7 137 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gm5072A2AHM1 344 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gm5478D3Z6R0 159 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Clca3bE9PUL3 1044 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Rb1P13405 921 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cdh9P70407 786 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Nkx2-3P97334 362 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ptger2Q62053 362 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tgoln2Q62314 363 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ssx9Q6XAS3 170 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Zswim5Q80TC6 1188 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Sfrp1Q8C4U3 314 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ildr1Q8CBR1 537 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Impg1Q8R1W8 798 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Pcdha1Q91Y21 948 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Commd8Q9CZG3 183 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Taf1dQ9D4V4 322 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ddx59Q9DBN9 619 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Trpm5Q9JJH7 1158 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Magel2Q9QZ04 1284 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ptgdr2Q9Z2J6 382 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cyp2b19O55071 492 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Igf2bp1O88477 577 aaKnown RBP9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Olfm1O88998 485 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mc4rP56450 332 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Gabrb2P63137 512 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Stt3bQ3TDQ1 823 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Abl2Q4JIM5 1182 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Dnajc11Q5U458 559 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Dnajc1Q61712 552 aaKnown RBP9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tex13c3Q810P0 219 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Cdkn2aipQ8BI72 563 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Dlgap2Q8BJ42 1059 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Kansl2Q8BQR4 486 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Olfr1302Q8VGE9 315 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Adck1Q9D0L4 525 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Sertad2Q9JJG5 309 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 A930018M24RikB7ZMY3 218 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Osbpl8B9EJ86 889 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 CkmP07310 381 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tmem65Q4VAE3 234 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Phactr4Q501J7 694 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ubxn7Q6P5G6 467 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Ints6Q6PCM2 883 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Taf5Q8C092 801 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Coq6Q8R1S0 476 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Tsen15Q8R3W5 168 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Aim2Q91VJ1 354 aaKnown RBP9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Sytl2Q99N50 950 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Bap1Q99PU7 728 aa9.94□□□□□ -0.82
Syne1-201ENSMUST00000041639 Dpy19l4A2AJQ3 722 aa9.93□□□□□ -0.82
Syne1-201ENSMUST00000041639 Fbxw9F8VPX2 458 aa9.93□□□□□ -0.82
Syne1-201ENSMUST00000041639 Mtnd3P03899 115 aa9.93□□□□□ -0.82
Syne1-201ENSMUST00000041639 PdgfrbP05622 1098 aa9.93□□□□□ -0.82
Syne1-201ENSMUST00000041639 Btbd3P58545 530 aa9.93□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms