RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Psmd9Q9CR00 222 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Hacd2Q9D3B1 254 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pi16Q9ET66 489 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Dach1Q9QYB2 751 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Dlc1Q9R0Z9 1092 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Plxna3P70208 1872 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Arhgef37A1IGU4 676 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Olfr652B9EHE6 318 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gm3259D3YUK0 475 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Nlrp12E9Q5R7 1054 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Grip2G3XA20 1042 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Mthfd2P18155 350 aaKnown RBP12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pax3P24610 479 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Trim71Q1PSW8 855 aaKnown RBP12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Afap1l2Q5DTU0 825 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Myo1gQ5SUA5 1024 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Mapre1Q61166 268 aaKnown RBP12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ssx9Q6XAS3 170 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 DcstampQ7TNJ0 470 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Olfr1128Q7TR47 311 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 SybuQ8BHS8 665 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Fam78aQ8C552 283 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Tgif2lx2Q8K5B9 231 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ttc30a1Q99J38 664 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 CenpsQ9D084 142 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Hddc3Q9D114 179 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Plin3Q9DBG5 437 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 D7h11orf16Q9JJR6 402 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Adamts9E9PUN6 1931 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Col5a3Q9JLI2 1739 aa12.89□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Zfp758E9QAA1 583 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Vmn2r19G5E8G4 854 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 DcxO88809 366 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Aldh3a1P47739 453 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Tial1P70318 392 aaKnown RBP12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Tp53i13Q5F267 385 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Maml1Q6T264 1020 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Kctd12Q6WVG3 327 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Slc41a1Q8BJA2 512 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Kansl2Q8BQR4 486 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rap2cQ8BU31 183 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Bmt2Q8BXK4 403 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Wwp1Q8BZZ3 918 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 RtknQ8C6B2 564 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Trib2Q8K4K3 343 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gtse1Q8R080 741 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Cog4Q8R1U1 785 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Olfr1494Q8VGP8 315 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Mrps2Q924T2 291 aaKnown RBP12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Znrf4Q9DAH2 327 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ap1m2Q9WVP1 423 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 CitP49025 2055 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Spin2dB1B0R2 236 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rad51ap2G3UW63 976 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Olfr743L7N1Y2 311 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Fpr-rs3O88537 343 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 MutP16332 748 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sap25Q1EHW4 186 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Fubp3Q3TIX6 575 aaKnown RBP12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sec31bQ3TZ89 1158 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Glp2rQ5IXF8 512 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Itih1Q61702 907 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ubxn7Q6P5G6 467 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Mon1aQ6PDG8 556 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Tigd3Q7TM95 470 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ofcc1Q8BGX4 166 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Mapkap1Q8BKH7 522 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Prkaa2Q8BRK8 552 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sik2Q8CFH6 931 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Trip10Q8CJ53 603 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 GrpQ8R1I2 146 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ten1Q9D7K2 161 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Kctd4Q9D7X1 259 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 EtfbQ9DCW4 255 aaKnown RBP12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Kat2aQ9JHD2 830 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Fbxo17Q9QZM8 286 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Atp11cQ9QZW0 1129 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sept6Q9R1T4 434 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gria4Q9Z2W8 902 aa12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Myo18aQ9JMH9 2050 aaKnown RBP12.88□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Trim30bE9PVL6 203 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gm14496K7N5U4 849 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sept7O55131 436 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 InvsO89019 1062 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 CcnoP0C242 352 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rpl36P47964 105 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Slc11a2P49282 568 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gpr162Q3UN16 588 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pcnx4Q3UVY5 1174 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Cyb5d1Q5NCY3 228 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Fzd6Q61089 709 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Lcp1Q61233 627 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Kcna4Q61423 654 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Phlda1Q62392 405 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rtl3Q6P1Y1 553 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Serpina12Q7TMF5 413 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Serpina3bQ8BYY9 420 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 PigwQ8C398 503 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Adam33Q923W9 797 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Anxa13Q99JG3 317 aa12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms