RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Dlg1Q811D0 905 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cxcl16Q8BSU2 246 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rab15Q8K386 212 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr589Q8VGV8 317 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Efhc2Q9D485 750 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gsdmdc1Q9D8T2 487 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rasgrp2Q9QUG9 608 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mapk11Q9WUI1 364 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Smarcb1Q9Z0H3 385 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rpl9-ps1S4R1R7 191 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Xlr5aA2BI45 236 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zscan5bB2RTN3 468 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kpna4O35343 521 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 ArP19091 899 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lta4hP24527 611 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PvalbP32848 110 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kcnj2P35561 428 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Psme3P61290 254 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vps45P97390 570 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pyroxd1Q3TMV7 498 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 CenplQ3U3S3 329 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Orm1Q60590 207 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fnip2Q80TD3 1108 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dusp4Q8BFV3 398 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fbxl21Q8BFZ4 434 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tspan9Q8BJU2 239 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 UstQ8BUB6 407 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 CherpQ8CGZ0 936 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rabl3Q9D4V7 236 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 H2bfmQ9DAB5 224 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 GhrlQ9EQX0 117 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fam171a1A2ATK9 892 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dhtkd1A2ATU0 921 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mup18A2BIM8 181 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Nipsnap3aB1AWZ3 247 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Catsperg2C6KI89 1145 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 LdhcP00342 332 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mup11P04938 181 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 AcadlP51174 430 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Csnk2bP67871 215 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rpl19P84099 196 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fcho2Q3UQN2 809 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tgfbrap1Q3UR70 860 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lrrc55Q3UY51 311 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm21320Q4FZE8 181 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Glp2rQ5IXF8 512 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pik3r5Q5SW28 871 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gpd2Q64521 727 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Larp4bQ6A0A2 741 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr297Q7TS07 310 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Atg4cQ811C2 458 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Kctd3Q8BFX3 815 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Arl15Q8BGR6 204 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Nars2Q8BGV0 477 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mrpl48Q8JZS9 211 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pcdhb19Q91Y01 801 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gjd3Q91YD1 278 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Prelid3bQ9CYY7 195 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 DnpepQ9Z2W0 473 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr625-ps1A0A140T8L4 321 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PtproE9Q612 1226 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm8374L7N2A9 172 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 TnfP06804 235 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Sstr1P30873 391 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Resp18P47939 175 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 MipP51180 263 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gabrb2P63137 512 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 GmpsQ3THK7 693 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gpsm3Q3U1Z5 159 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dnaaf3Q3UYV8 586 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PapolgQ6PCL9 739 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr412Q7TRW7 312 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Arhgef38Q80VK6 770 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tsen15Q8R3W5 168 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 CarfQ8VHI4 689 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fam96aQ9DCL2 160 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 SpastQ9QYY8 614 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zc3h7aE9PWW6 970 aaKnown RBP9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Olfr521E9Q519 321 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hoxa2P31245 372 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 LipeP54310 759 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Glt6d1Q2NKH9 311 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fscn1Q61553 493 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ppp1r14bQ62084 147 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PstkQ8BP74 359 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lgi2Q8K4Z0 550 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Atxn7Q8R4I1 867 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lars2Q8VDC0 902 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mark1Q8VHJ5 795 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gtf2ird2Q99NI3 936 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ppp1r3gQ9CW07 347 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Taf1dQ9D4V4 322 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rreb1Q3UH06 1700 aaKnown RBP9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cul7Q8VE73 1689 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ect2lA0A140LIP2 953 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ccdc120A2AEV7 629 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mtx3D3YTP3 312 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vmn2r72D3Z4N8 856 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm6460F6YJZ8 199 aa9.26□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc9a3G3X939 829 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms