RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 TAC4Q86UU9 113 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 CCDC170Q8IYT3 715 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TBC1D3Q8IZP1 549 aaPredicted RBP10.3□□□□□ -0.76
PHGDH-222ENST00000641587 LGI2Q8N0V4 545 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 FGF11Q92914 225 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 SLC39A13Q96H72 371 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 UCKL1Q9NWZ5 548 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 NOCTQ9UK39 431 aaKnown RBP10.3□□□□□ -0.76
PHGDH-222ENST00000641587 NAALADL1Q9UQQ1 740 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 TENM4Q6N022 2769 aa10.3□□□□□ -0.76
PHGDH-222ENST00000641587 SIGLEC6O43699 453 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 NDUFA10O95299 355 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 ADH1BP00325 375 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 SRPRAP08240 638 aaKnown RBP10.29□□□□□ -0.76
PHGDH-222ENST00000641587 CDR2Q01850 454 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 SYPL2Q5VXT5 272 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 RNF219Q5W0B1 726 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-222ENST00000641587 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 CHSY1Q86X52 802 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 ZNF677Q86XU0 584 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 PASD1Q8IV76 773 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 DCBLD1Q8N8Z6 715 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 ZNF557Q8N988 423 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-222ENST00000641587 MFSD2AQ8NA29 543 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 KDM1BQ8NB78 822 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 OR52K2Q8NGK3 314 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 FRS2Q8WU20 508 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 RFFLQ8WZ73 363 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 IRGQQ8WZA9 623 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 KLK6Q92876 244 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 AZIN2Q96A70 460 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 FAM149B1Q96BN6 582 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 LGMNQ99538 433 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 DESI2Q9BSY9 194 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 SEMA4CQ9C0C4 833 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 ERVMER34-1Q9H9K5 563 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 CPNE5Q9HCH3 593 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 FZD3Q9NPG1 666 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 CYTH4Q9UIA0 394 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 PYCARDQ9ULZ3 195 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 TLR6Q9Y2C9 796 aa10.29□□□□□ -0.76
PHGDH-222ENST00000641587 EPN1Q9Y6I3 576 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-222ENST00000641587 TEX51A0A1B0GUA7 166 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 TMCO5BA8MYB1 307 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 FFAR2O15552 330 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 PLRG1O43660 514 aaKnown RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 MOCS3O95396 460 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 MT-CO3P00414 261 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 MPOP05164 745 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 CDK4P11802 303 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 KRT10P13645 584 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 PRLRP16471 622 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 CHRNB2P17787 502 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 TACR2P21452 398 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 ACP1P24666 158 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 GGCXP38435 758 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 IRAK1P51617 712 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 FMO1Q01740 532 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 CFHR1Q03591 330 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 CNTN1Q12860 1018 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 SFSWAPQ12872 951 aaKnown RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 ILKQ13418 452 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 ELAVL3Q14576 367 aaKnown RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 STILQ15468 1287 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 SLC18A3Q16572 532 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 SLC45A4Q5BKX6 768 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 CCDC122Q5T0U0 273 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 AGBL4Q5VU57 503 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 TRIM72Q6ZMU5 477 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 KIAA1328Q86T90 577 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 PRPF39Q86UA1 669 aaKnown RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 CCDC117Q8IWD4 279 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 SLC25A45Q8N413 288 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 OXR1Q8N573 874 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 ACRBPQ8NEB7 543 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 ZNF606Q8WXB4 792 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 FAM131CQ96AQ9 280 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 SERPINB11Q96P15 392 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 DDX50Q9BQ39 737 aaKnown RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 IRX2Q9BZI1 471 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 LUC7LQ9NQ29 371 aaKnown RBP10.28□□□□□ -0.76
PHGDH-222ENST00000641587 KIAA1257Q9ULG3 409 aa10.28□□□□□ -0.76
PHGDH-222ENST00000641587 COL27A1Q8IZC6 1860 aaPredicted RBP10.27□□□□□ -0.76
PHGDH-222ENST00000641587 COL6A6A6NMZ7 2263 aa10.27□□□□□ -0.76
PHGDH-222ENST00000641587 A0A087X0T9 212 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 A0A1B0GVM2 712 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 EIF3CLB5ME19 914 aaKnown RBP10.27□□□□□ -0.77
PHGDH-222ENST00000641587 RNF103O00237 685 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 DDX3XO00571 662 aaKnown RBP eCLIP10.27□□□□□ -0.777e-18■■■□□ 16.8
PHGDH-222ENST00000641587 CAPN9O14815 690 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 BNIP3LO60238 219 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 CCDC175P0C221 793 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 FAM228BP0C875 321 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 GIMD1P0DJR0 217 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 ACTN2P35609 894 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 TAS2R38P59533 333 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 KRT83P78385 493 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 DAB2P98082 770 aa10.27□□□□□ -0.77
PHGDH-222ENST00000641587 CENPCQ03188 943 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms