RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 KCNT1Q5JUK3 1230 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 PPP1R15BQ5SWA1 713 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 SCYL2Q6P3W7 929 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 TRIM69Q86WT6 500 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 PPP1R16AQ96I34 528 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 CNPY3Q9BT09 278 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 SYT11Q9BT88 431 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 MAGEH1Q9H213 219 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 DNAI1Q9UI46 699 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 HPCAL4Q9UM19 191 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 DMTF1Q9Y222 760 aa25.74■■□□□ 1.71
VEGFA-230ENST00000640482 PLXNA2O75051 1894 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 H0Y8X5 98 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 KCNK3O14649 394 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 RAMP2O60895 175 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 TOP3BO95985 862 aaKnown RBP25.73■■□□□ 1.71
VEGFA-230ENST00000640482 SPINK2P20155 84 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 AIF1P55008 147 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 RPL7AP62424 266 aaKnown RBP25.73■■□□□ 1.71
VEGFA-230ENST00000640482 SFMBT2Q5VUG0 894 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 NAPEPLDQ6IQ20 393 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 DPY19L3Q6ZPD9 716 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 GLRX5Q86SX6 157 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 CHST14Q8NCH0 376 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 GRIN3AQ8TCU5 1115 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 RHBDD1Q8TEB9 315 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 CDC6Q99741 560 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 NDFIP2Q9NV92 336 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 NEU3Q9UQ49 428 aa25.73■■□□□ 1.71
VEGFA-230ENST00000640482 A0A1W2PR77 199 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 HYAL3O43820 417 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-230ENST00000640482 PCDHGA12O60330 932 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 ZNF821O75541 412 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-230ENST00000640482 WNT1P04628 370 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 MAT2AP31153 395 aaKnown RBP25.72■■□□□ 1.71
VEGFA-230ENST00000640482 L1CAMP32004 1257 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 ACVRL1P37023 503 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 ST3GAL2Q16842 350 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 SETMARQ53H47 684 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-230ENST00000640482 ARSIQ5FYB1 569 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 PIP5KL1Q5T9C9 394 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 ARHGEF2Q92974 986 aaKnown RBP25.72■■□□□ 1.71
VEGFA-230ENST00000640482 NAP1L5Q96NT1 182 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-230ENST00000640482 MAGEB5Q9BZ81 275 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 EDEM3Q9BZQ6 932 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 GDF3Q9NR23 364 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 PARVAQ9NVD7 372 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 TAS2R14Q9NYV8 317 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 AIPL1Q9NZN9 384 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 ARHGAP20Q9P2F6 1191 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 APOBEC2Q9Y235 224 aaKnown RBP25.72■■□□□ 1.71
VEGFA-230ENST00000640482 NEUROG3Q9Y4Z2 214 aa25.72■■□□□ 1.71
VEGFA-230ENST00000640482 SYCE3A1L190 88 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 PCNX2A6NKB5 2137 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 TMCO5BA8MYB1 307 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 FTH1P19P0C7X4 201 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 GRK6P43250 576 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 DNA2P51530 1060 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 POLD3Q15054 466 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-230ENST00000640482 INAVAQ3KP66 663 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 CARD16Q5EG05 197 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 NEK5Q6P3R8 708 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 ISG20Q96AZ6 181 aaKnown RBP25.71■■□□□ 1.71
VEGFA-230ENST00000640482 ARRDC3Q96B67 414 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 ELF4Q99607 663 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-230ENST00000640482 EPAS1Q99814 870 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 HEPHQ9BQS7 1158 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 HAUS4Q9H6D7 363 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 FZD10Q9ULW2 581 aa25.71■■□□□ 1.71
VEGFA-230ENST00000640482 FCF1Q9Y324 198 aaKnown RBP25.71■■□□□ 1.71
VEGFA-230ENST00000640482 A0A1B0GTQ1 180 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 WNT9AO14904 365 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 LEFTY1O75610 366 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 EPHB2P29323 1055 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 TAS2R38P59533 333 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 NR1I3Q14994 352 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 ERN2Q76MJ5 926 aaKnown RBP25.7■■□□□ 1.7
VEGFA-230ENST00000640482 PYROXD2Q8N2H3 581 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 MFSD2AQ8NA29 543 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 BAHD1Q8TBE0 780 aaPredicted RBP25.7■■□□□ 1.7
VEGFA-230ENST00000640482 HDAC8Q9BY41 377 aa25.7■■□□□ 1.7
VEGFA-230ENST00000640482 TLR4O00206 839 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 YKT6O15498 198 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 MAGEC1O60732 1142 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 RNGTTO60942 597 aaKnown RBP25.69■■□□□ 1.7
VEGFA-230ENST00000640482 PRKCIP41743 596 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 CCNHP51946 323 aaPredicted RBP25.69■■□□□ 1.7
VEGFA-230ENST00000640482 IL9RQ01113 521 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 KLHL30Q0D2K2 578 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 MAMLD1Q13495 774 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 STAT4Q14765 748 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 UNQ6494/PRO21346Q6UXR6 183 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 TMC6Q7Z403 805 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 RAB44Q7Z6P3 723 aaPredicted RBP25.69■■□□□ 1.7
VEGFA-230ENST00000640482 IQCHQ86VS3 1027 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 ZNF354CQ86Y25 554 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 PLPP6Q8IY26 295 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 RTL3Q8N8U3 475 aaKnown RBP25.69■■□□□ 1.7
VEGFA-230ENST00000640482 TTYH3Q9C0H2 523 aa25.69■■□□□ 1.7
VEGFA-230ENST00000640482 CATSPERBQ9H7T0 1116 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms