RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CDYLQ9Y232 598 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 ATP6AP2A0A1C7CYW4 349 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 CCL22O00626 93 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 ATP6AP2O75787 350 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 AHSGP02765 367 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 CTSHP09668 335 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 SLC12A2P55011 1212 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 BEX3Q00994 111 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 MS4A2Q01362 244 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 CACNB2Q08289 660 aaPredicted RBP14.83□□□□□ -0.04
SCARB2-221ENST00000640341 CSHL1Q14406 222 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 TLR1Q15399 786 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 CYTH1Q15438 398 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 STXBP5Q5T5C0 1151 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 TMEM135Q86UB9 458 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 MFN1Q8IWA4 741 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 SERPINI1Q99574 410 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 MAF1Q9H063 256 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 OXSMQ9NWU1 459 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 IPPQ9Y573 584 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 GPR32O75388 356 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 CHRNA4P43681 627 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 RAB27AP51159 221 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 NME5P56597 212 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 CDK18Q07002 472 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 ARL13BQ3SXY8 428 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 CYP2R1Q6VVX0 501 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 GK5Q6ZS86 529 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 SLC10A4Q96EP9 437 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 PCED1BQ96HM7 432 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 DNAJC1Q96KC8 554 aaKnown RBP14.82□□□□□ -0.04
SCARB2-221ENST00000640341 PRPF18Q99633 342 aaKnown RBP14.82□□□□□ -0.04
SCARB2-221ENST00000640341 GRIP2Q9C0E4 1043 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 WDR41Q9HAD4 459 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 ADARB2Q9NS39 739 aaKnown RBP14.82□□□□□ -0.04
SCARB2-221ENST00000640341 TLL2Q9Y6L7 1015 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 RGSL1A5PLK6 1076 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 H3BNX3 289 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 MPOP05164 745 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 ATP5BP06576 529 aaKnown RBP14.82□□□□□ -0.04
SCARB2-221ENST00000640341 MYL4P12829 197 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 ITKQ08881 620 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 ANO4Q32M45 955 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 RTKNQ9BST9 563 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 FICDQ9BVA6 458 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 COLEC11Q9BWP8 271 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 PCDHAC1Q9H158 963 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 CCDC167Q9P0B6 97 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 ZNF487B1APH4 448 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 PDHXO00330 501 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 MATN2O00339 956 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 AURKAO14965 403 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 XPOTO43592 962 aaKnown RBP14.82□□□□□ -0.04
SCARB2-221ENST00000640341 CYP2B6P20813 491 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 GJA5P36382 358 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 PRPSAP1Q14558 356 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 SNX17Q15036 470 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 PAFAH1B3Q15102 231 aaKnown RBP14.82□□□□□ -0.04
SCARB2-221ENST00000640341 LIPMQ5VYY2 423 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 ZNF470Q6ECI4 717 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 KBTBD6Q86V97 674 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 CEP97Q8IW35 865 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 SENP8Q96LD8 212 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 HNRNPABQ99729 332 aaKnown RBP14.82□□□□□ -0.04
SCARB2-221ENST00000640341 FSD1LQ9BXM9 530 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 CRTAC1Q9NQ79 661 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 DNAJB4Q9UDY4 337 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 ACOT9Q9Y305 439 aa14.82□□□□□ -0.04
SCARB2-221ENST00000640341 hCG_2014768A0A024R1R8 64 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 C9IYK1 514 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 KIF3CO14782 793 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 CHN2P52757 468 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 GJA9P57773 515 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 CDH17Q12864 832 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 RALGDSQ12967 914 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 CEACAM7Q14002 265 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 LDB1Q86U70 411 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-221ENST00000640341 RYBPQ8N488 228 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-221ENST00000640341 GAD1Q99259 594 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 EPAS1Q99814 870 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 DNAI2Q9GZS0 605 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 VTA1Q9NP79 307 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 DDX18Q9NVP1 670 aaKnown RBP14.81□□□□□ -0.04
SCARB2-221ENST00000640341 RAP2CQ9Y3L5 183 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 MYL3P08590 195 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 NAB1Q13506 487 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 RARS2Q5T160 578 aaKnown RBP14.81□□□□□ -0.04
SCARB2-221ENST00000640341 ITPRIPL1Q6GPH6 555 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 ZC3HC1Q86WB0 502 aaKnown RBP14.81□□□□□ -0.04
SCARB2-221ENST00000640341 PAAF1Q9BRP4 392 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 GBA3Q9H227 469 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 IL1RL2Q9HB29 575 aa14.81□□□□□ -0.04
SCARB2-221ENST00000640341 WDR6Q9NNW5 1121 aaKnown RBP14.81□□□□□ -0.04
SCARB2-221ENST00000640341 RCOR3Q9P2K3 495 aaPredicted RBP14.81□□□□□ -0.04
SCARB2-221ENST00000640341 KCNU1A8MYU2 1149 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 DLX3O60479 287 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 DDHD2O94830 711 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 GABRB3P28472 473 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 GEN1Q17RS7 908 aa14.8□□□□□ -0.04
SCARB2-221ENST00000640341 ZNF792Q3KQV3 632 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms