RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 BRCA2P51587 3418 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 DNAJA2O60884 412 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 HNRNPLP14866 589 aaKnown RBP eCLIP16.81■□□□□ 0.284e-7■□□□□ 10
HNRNPU-228ENST00000640306 NELFEP18615 380 aaKnown RBP16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 HDCP19113 662 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 GABRB3P28472 473 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 SNAPC2Q13487 334 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 ARHGAP36Q6ZRI8 547 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 ARRDC4Q8NCT1 418 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 TNIP3Q96KP6 325 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 TSNARE1Q96NA8 513 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 SEMA6AQ9H2E6 1030 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 ADAMTS10Q9H324 1103 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 WDR41Q9HAD4 459 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 CYP4F12Q9HCS2 524 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 TMEM30AQ9NV96 361 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 RAP2CQ9Y3L5 183 aa16.81■□□□□ 0.28
HNRNPU-228ENST00000640306 TIMM44O43615 452 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 VAPBO95292 243 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 CRTAMO95727 393 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 AHSGP02765 367 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 LILRA4P59901 499 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 MAP3K21Q5TCX8 1036 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 LIPMQ5VYY2 423 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 DNAJB3Q8WWF6 145 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 NXNL1Q96CM4 212 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 PKP2Q99959 881 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 SIK2Q9H0K1 926 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 ADA2Q9NZK5 511 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 AP4B1Q9Y6B7 739 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 A0A1B0GTW7 788 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 PTPN1P18031 435 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 LAMB3Q13751 1172 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 ZNF423Q2M1K9 1284 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 RWDD4Q6NW29 188 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 RBM44Q6ZP01 1051 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 GK5Q6ZS86 529 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 CEP97Q8IW35 865 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 TMEM151AQ8N4L1 468 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 IPMKQ8NFU5 416 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 LENG1Q96BZ8 264 aaPredicted RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 PRPF18Q99633 342 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 MROH8Q9H579 483 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 CDYLQ9Y232 598 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 OTOFQ9HC10 1997 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 TMEM114B3SHH9 223 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 DFFAO00273 331 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 CASQ2O14958 399 aaPredicted RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 CSPG5O95196 566 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 PABPC4LP0CB38 370 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 SLC35E2BP0CK96 405 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 SMIM18P0DKX4 95 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 SMPD1P17405 629 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 FGFR3P22607 806 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 PPARGP37231 505 aaPredicted RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 NUMBP49757 651 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 NRF1Q16656 503 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 SLC5A9Q2M3M2 681 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 ANO4Q32M45 955 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 C16orf89Q6UX73 402 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 ZC3HC1Q86WB0 502 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 MPP4Q96JB8 637 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 KLHL32Q96NJ5 620 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 SERPINI1Q99574 410 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 EPAS1Q99814 870 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 DRC3Q9H069 523 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 GBA3Q9H227 469 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 WDR6Q9NNW5 1121 aaKnown RBP16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 GTSE1Q9NYZ3 720 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 LZTS1Q9Y250 596 aa16.8■□□□□ 0.28
HNRNPU-228ENST00000640306 MEIS3P2A8K0S8 358 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 PEX1O43933 1283 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 DLX3O60479 287 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 GPR32O75388 356 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 RPS6KA3P51812 740 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 PLK1P53350 603 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 CDKL1Q00532 357 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 GRM2Q14416 872 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 KCTD11Q693B1 232 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 ALKAL1Q6UXT8 129 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 ZNF410Q86VK4 478 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 CENPLQ8N0S6 344 aaPredicted RBP16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 LSMEM2Q8N112 164 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 RNF34Q969K3 372 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 ISL2Q96A47 359 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 PCDHAC1Q9H158 963 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 VCX3AQ9NNX9 186 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 SLC2A6Q9UGQ3 507 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 DERAQ9Y315 318 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 TLL2Q9Y6L7 1015 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 CLPTM1O96005 669 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 RPL34P49207 117 aaKnown RBP16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 CCNA1P78396 465 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 PPIDQ08752 370 aaKnown RBP16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 DGKDQ16760 1214 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 PIGGQ5H8A4 983 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 SH2D4BQ5SQS7 431 aa16.79■□□□□ 0.28
HNRNPU-228ENST00000640306 RARS2Q5T160 578 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms