RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CDK18Q07002 472 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 STX3Q13277 289 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 PRPSAP1Q14558 356 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 SMAD1Q15797 465 aaKnown RBP15.35■□□□□ 0.05
TRIM3-215ENST00000639856 INSCQ1MX18 579 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 ANKRD20A4Q4UJ75 823 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 C10orf120Q5SQS8 335 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 CERCAMQ5T4B2 595 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 N4BP2L1Q5TBK1 243 aaPredicted RBP15.35■□□□□ 0.05
TRIM3-215ENST00000639856 C16orf46Q6P387 395 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 ARHGAP36Q6ZRI8 547 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 NECAB2Q7Z6G3 386 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 CRLF3Q8IUI8 442 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 ARID3BQ8IVW6 561 aaPredicted RBP15.35■□□□□ 0.05
TRIM3-215ENST00000639856 KLHDC8BQ8IXV7 354 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 CNTD1Q8N815 330 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 AUTS2Q8WXX7 1259 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 RBBP8Q99708 897 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 OXCT2Q9BYC2 517 aaPredicted RBP15.35■□□□□ 0.05
TRIM3-215ENST00000639856 IL22Q9GZX6 179 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 C2orf71A6NGG8 1288 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 E9PAM4 449 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 AP3B1O00203 1094 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 ATP9BO43861 1147 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 CACNG3O60359 315 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 PLIN3O60664 434 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 HMBSP08397 361 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 TYK2P29597 1187 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 HOXC13P31276 330 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 IRX4P78413 519 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 FASTKD1Q53R41 847 aaKnown RBP15.35■□□□□ 0.05
TRIM3-215ENST00000639856 NAPEPLDQ6IQ20 393 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 AGAP11Q8TF27 550 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 ISL2Q96A47 359 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 TBC1D31Q96DN5 1066 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 TMEM169Q96HH4 297 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 C20orf27Q9GZN8 174 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 ZNF395Q9H8N7 513 aaPredicted RBP15.35■□□□□ 0.05
TRIM3-215ENST00000639856 THAP1Q9NVV9 213 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 CLIC5Q9NZA1 410 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 MARCH2Q9P0N8 246 aa15.35■□□□□ 0.05
TRIM3-215ENST00000639856 NYNRINQ9P2P1 1898 aaKnown RBP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 DOCK4Q8N1I0 1966 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 DFFAO00273 331 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 FGF10O15520 208 aaPredicted RBP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 PSMD3O43242 534 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 DNAJB2P25686 324 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 SPRP35270 261 aaPredicted RBP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 TUBP50607 506 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 CDH17Q12864 832 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 WLSQ5T9L3 541 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 TEDDM1Q5T9Z0 273 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 FAM91A1Q658Y4 838 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 ZCCHC23Q6ZST2 131 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 ARHGAP12Q8IWW6 846 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 LZTR1Q8N653 840 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 MFSD3Q96ES6 412 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 PTCD3Q96EY7 689 aaKnown RBP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 APOL2Q9BQE5 337 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 CATSPERBQ9H7T0 1116 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 TLE6Q9H808 572 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 ARL8BQ9NVJ2 186 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 UBP1Q9NZI7 540 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 ZDHHC11BP0C7U3 371 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 MAGEA12P43365 314 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 LIMK2P53671 638 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 MLLT6P55198 1093 aaPredicted RBP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 DSG1Q02413 1049 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 HSF5Q4G112 596 aaPredicted RBP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 PREPLQ4J6C6 727 aaPredicted RBP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 STRA8Q7Z7C7 330 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 LINC00523Q86TU6 105 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 DCLK2Q8N568 766 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 ATPAF2Q8N5M1 289 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 PPP1R14CQ8TAE6 165 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 NSL1Q96IY1 281 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 SOX13Q9UN79 622 aa15.34■□□□□ 0.05
TRIM3-215ENST00000639856 AAR2Q9Y312 384 aaKnown RBP15.34■□□□□ 0.05
TRIM3-215ENST00000639856 SLC12A8A0AV02 714 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 FCHO1O14526 889 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 TLR5O60602 858 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 CCDC22O60826 627 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 WFS1O76024 890 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 PROCP04070 461 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 CCND1P24385 295 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 PSEN1P49768 467 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 KRT72Q14CN4 511 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 PCLAFQ15004 111 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 E2F5Q15329 346 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 HSP90AA5PQ58FG0 334 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 MS4A13Q5J8X5 152 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 PPM1JQ5JR12 505 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 MBLAC2Q68D91 279 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 OTOP3Q7RTS5 596 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 LONP2Q86WA8 852 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 CMTR2Q8IYT2 770 aaKnown RBP15.33■□□□□ 0.04
TRIM3-215ENST00000639856 PLCD3Q8N3E9 789 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 TMEM199Q8N511 208 aa15.33■□□□□ 0.04
TRIM3-215ENST00000639856 PRR11Q96HE9 360 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms