RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MTSS1LQ765P7 747 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 PLEKHH3Q7Z736 793 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 RNF180Q86T96 592 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 REPS2Q8NFH8 660 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 ABCB10Q9NRK6 738 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 BIRC5O15392 142 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 SEC24AO95486 1093 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 IDH2P48735 452 aaKnown RBP18.72■□□□□ 0.59
SCARB2-213ENST00000638680 TMEM63BQ5T3F8 832 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 GLT1D1Q96MS3 346 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 ACSS3Q9H6R3 686 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 PNPLA3Q9NST1 481 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 COG5Q9UP83 839 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 RECQL5O94762 991 aaPredicted RBP18.72■□□□□ 0.59
SCARB2-213ENST00000638680 NFE2Q16621 373 aaPredicted RBP18.72■□□□□ 0.59
SCARB2-213ENST00000638680 MCOLN3Q8TDD5 553 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 KCTD4Q8WVF5 259 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 DNAJB3Q8WWF6 145 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 MCRS1Q96EZ8 462 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 FBXO44Q9H4M3 255 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 ARL8BQ9NVJ2 186 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 hCG_1818297A0A087WSY0 165 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 CAPN1P07384 714 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 OR56A5P0C7T3 313 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 ATP5F1P24539 256 aaPredicted RBP18.72■□□□□ 0.59
SCARB2-213ENST00000638680 SLC5A9Q2M3M2 681 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 C10orf107Q8IVU9 208 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 MTG1Q9BT17 334 aaPredicted RBP18.72■□□□□ 0.59
SCARB2-213ENST00000638680 ARHGAP28Q9P2N2 729 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 TYMPP19971 482 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 PROX1Q92786 737 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 DDX4Q9NQI0 724 aaKnown RBP18.71■□□□□ 0.59
SCARB2-213ENST00000638680 MYL4P12829 197 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 JAK1P23458 1154 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 EPHA3P29320 983 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 IL2P60568 153 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 SPIRE1Q08AE8 756 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 TIMM50Q3ZCQ8 353 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 IRF2BP2Q7Z5L9 587 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 TRABD2AQ86V40 505 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 LGI2Q8N0V4 545 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 RNF157Q96PX1 679 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 SLC17A7Q9P2U7 560 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 MORF4L1Q9UBU8 362 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 KLQ9UEF7 1012 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 PRKAG3Q9UGI9 489 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 RPL26L1Q9UNX3 145 aaKnown RBP18.71■□□□□ 0.59
SCARB2-213ENST00000638680 GABRB2P47870 512 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 CDC73Q6P1J9 531 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 AAGABQ6PD74 315 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 TNS4Q8IZW8 715 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 ULBP1Q9BZM6 244 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 PCDHB5Q9Y5E4 795 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 AK5Q9Y6K8 562 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 MEGF6O75095 1541 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 AVILO75366 819 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 CNPP09543 421 aaKnown RBP18.71■□□□□ 0.59
SCARB2-213ENST00000638680 NELFEP18615 380 aaKnown RBP18.71■□□□□ 0.59
SCARB2-213ENST00000638680 GSTCDQ8NEC7 633 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 PSMA8Q8TAA3 256 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 SNRNP25Q9BV90 132 aaKnown RBP18.71■□□□□ 0.59
SCARB2-213ENST00000638680 OSBPL11Q9BXB4 747 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 AP3M1Q9Y2T2 418 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 RAP2CQ9Y3L5 183 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 RBAK-RBAKDNI3L0D1 243 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 ITGA2BP08514 1039 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 VEGFAP15692 232 aaPredicted RBP18.71■□□□□ 0.59
SCARB2-213ENST00000638680 TSPAN8P19075 237 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 HNRNPH3P31942 346 aaKnown RBP18.71■□□□□ 0.59
SCARB2-213ENST00000638680 TGM3Q08188 693 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 ZBTB46Q86UZ6 589 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 POC5Q8NA72 575 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 STAG3L4Q8TBR4 150 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 NDNQ99608 321 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 GMPPBQ9Y5P6 360 aa18.71■□□□□ 0.59
SCARB2-213ENST00000638680 FSCN2O14926 492 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 SNAP91O60641 907 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 TGFB3P10600 412 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 SPESP1Q6UW49 350 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 CDK5RAP1Q96SZ6 601 aaKnown RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 EPB41L4BQ9H329 900 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 STN1Q9H668 368 aaKnown RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 KIAA1210Q9ULL0 1709 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 BCLAF3A2AJT9 711 aaKnown RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 KLHL18O94889 574 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 FGFR1P11362 822 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 GSTM5P46439 218 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 ATAD3BQ5T9A4 648 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 GATAD2AQ86YP4 633 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 VAV3Q9UKW4 847 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 RNF225M0QZC1 329 aaPredicted RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 IFRD1O00458 451 aaPredicted RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 HOXB8P17481 243 aaPredicted RBP18.7■□□□□ 0.58
SCARB2-213ENST00000638680 YWHAQP27348 245 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 TAS2R40P59535 323 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 PRKCQQ04759 706 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 CRY1Q16526 586 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 DDI2Q5TDH0 399 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 ZNF544Q6NX49 715 aa18.7■□□□□ 0.58
SCARB2-213ENST00000638680 KIAA0408Q6ZU52 694 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms