RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 C9orf16Q9BUW7 83 aa16.87■□□□□ 0.29
SCARB2-210ENST00000638567 ACTR8Q9H981 624 aa16.87■□□□□ 0.29
SCARB2-210ENST00000638567 PNMA8BQ9ULN7 279 aaPredicted RBP16.87■□□□□ 0.29
SCARB2-210ENST00000638567 C2CD4BA6NLJ0 364 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 TRIM38O00635 465 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 ECHS1P30084 290 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 SERPINB1P30740 379 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 FAM120BQ96EK7 910 aaKnown RBP16.86■□□□□ 0.29
SCARB2-210ENST00000638567 FOPNLQ96NB1 174 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 GOLGA2P5Q9HBQ8 144 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 PRPF19Q9UMS4 504 aaKnown RBP16.86■□□□□ 0.29
SCARB2-210ENST00000638567 PLIN3O60664 434 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 UQCRBP14927 111 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 NELFEP18615 380 aaKnown RBP16.86■□□□□ 0.29
SCARB2-210ENST00000638567 FSTL1Q12841 308 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 PCDH19Q8TAB3 1148 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 GLMNQ92990 594 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 KLRG1Q96E93 195 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 MAML3Q96JK9 1138 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 MLNP12872 115 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 KLRC2P26717 231 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 PSEN2P49810 448 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 PEX6Q13608 980 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 SLC39A4Q6P5W5 647 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 RBM44Q6ZP01 1051 aaKnown RBP16.86■□□□□ 0.29
SCARB2-210ENST00000638567 LMO3Q8TAP4 145 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 GLT1D1Q96MS3 346 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 SPAG4Q9NPE6 437 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.86■□□□□ 0.29
SCARB2-210ENST00000638567 C1orf232A0A0U1RR37 186 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 PEX11AO75192 247 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 LYNP07948 512 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 CSH1P0DML2 217 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 CSH2P0DML3 217 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 LBPP18428 481 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 FMO4P31512 558 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 ADRA1BP35368 520 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 CD86P42081 329 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 CDH13P55290 713 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 BEX3Q00994 111 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 CAMK1DQ8IU85 385 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 TMEM86AQ8N2M4 240 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 NAT8LQ8N9F0 302 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 NPAS2Q99743 824 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 COMMD8Q9NX08 183 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 IMPAD1Q9NX62 359 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 SPASTQ9UBP0 616 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 VPS28Q9UK41 221 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 COMMD3-BMI1R4GMX3 469 aa16.86■□□□□ 0.29
SCARB2-210ENST00000638567 BCL10O95999 233 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 ITGALP20701 1170 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 CCNHP51946 323 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-210ENST00000638567 RHOAP61586 193 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 GAD2Q05329 585 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 DCTN2Q13561 401 aaKnown RBP16.85■□□□□ 0.29
SCARB2-210ENST00000638567 PYROXD2Q8N2H3 581 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 MFSD3Q96ES6 412 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 MRPL57Q9BQC6 102 aaKnown RBP16.85■□□□□ 0.29
SCARB2-210ENST00000638567 RHOJQ9H4E5 214 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 LIMD1Q9UGP4 676 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 CDH22Q9UJ99 828 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 SPDYE5A6NIY4 337 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 UGT1A9O60656 530 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 IL5RAQ01344 420 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 SPDYE7PQ495Y7 208 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 TRPC4APQ8TEL6 797 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 ZMAT2Q96NC0 199 aaKnown RBP16.85■□□□□ 0.29
SCARB2-210ENST00000638567 KCTD15Q96SI1 283 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-210ENST00000638567 SH3GL1Q99961 368 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 ADGRE3Q9BY15 652 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 DPY30Q9C005 99 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 UGT1A7Q9HAW7 530 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 UGT1A10Q9HAW8 530 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 UGT1A8Q9HAW9 530 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 PARVBQ9HBI1 364 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 ZFYVE28Q9HCC9 887 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 CYLDQ9NQC7 956 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 CHRAC1Q9NRG0 131 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 PSMD13Q9UNM6 376 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 C15orf38-AP3S2A0A0A6YYH1 394 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 CCNT2O60583 730 aaKnown RBP16.85■□□□□ 0.29
SCARB2-210ENST00000638567 CCNG1P51959 295 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 MAXP61244 160 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 ATP1A4Q13733 1029 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 ARPINQ7Z6K5 226 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 OR52K2Q8NGK3 314 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 DNAJB14Q8TBM8 379 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 MAGEE2Q8TD90 523 aaPredicted RBP16.85■□□□□ 0.29
SCARB2-210ENST00000638567 FBXO44Q9H4M3 255 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 TMEM216Q9P0N5 145 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 SH3BP1Q9Y3L3 701 aa16.85■□□□□ 0.29
SCARB2-210ENST00000638567 EPHX2P34913 555 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 NR1H2P55055 460 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 ADARP55265 1226 aaKnown RBP16.84■□□□□ 0.29
SCARB2-210ENST00000638567 MPP2Q14168 576 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 INSCQ1MX18 579 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 SLC5A9Q2M3M2 681 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 PGS1Q32NB8 556 aa16.84■□□□□ 0.29
SCARB2-210ENST00000638567 TRIM60Q495X7 471 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms