RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 E9PAM4 449 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SNUPNO95149 360 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 OAZ2O95190 189 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 F12P00748 615 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 OR4Q2P0C623 313 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ACRP10323 421 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ADRA1DP25100 572 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 CORO1AP31146 461 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 MAGEA10P43363 369 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 CDK7P50613 346 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ABCE1P61221 599 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 TRIM32Q13049 653 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ART3Q13508 389 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 PEX6Q13608 980 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SLC12A1Q13621 1099 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 HNRNPDQ14103 355 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 TEX44Q53QW1 395 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 TMEM31Q5JXX7 168 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SH3PXD2AQ5TCZ1 1133 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 PTCRAQ6ISU1 281 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 RTL3Q8N8U3 475 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 BHMTQ93088 406 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ZBTB9Q96C00 473 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 OTUB2Q96DC9 234 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 PGM2Q96G03 612 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 PAFAH2Q99487 392 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 MLPHQ9BV36 600 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 ZCWPW1Q9H0M4 648 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SMOC2Q9H3U7 446 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ANKZF1Q9H8Y5 726 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 CFAP97Q9P2B7 532 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 DEC1Q9P2X7 70 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SLC39A10Q9ULF5 831 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 FCF1Q9Y324 198 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 ACTL7BQ9Y614 415 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ANKRD31Q8N7Z5 1873 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 COL11A2P13942 1736 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 TNS1Q9HBL0 1735 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 TMEM247A6NEH6 219 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 C5orf60A6NFR6 353 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 CHUKO15111 745 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ZW10O43264 779 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 RIPK2O43353 540 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 FGF18O76093 207 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 RPN2P04844 631 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ESRRAP11474 423 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 PBX3P40426 434 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 GAD2Q05329 585 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SGCGQ13326 291 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 LBRQ14739 615 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 RBBP5Q15291 538 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 DBN1Q16643 649 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 CCDC153Q494R4 210 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 PLEKHG4Q58EX7 1191 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 MARCH8Q5T0T0 291 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 THEMIS2Q5TEJ8 643 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ARMC3Q5W041 872 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 DUPD1Q68J44 220 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 GLT6D1Q7Z4J2 308 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SETD3Q86TU7 594 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 TAC4Q86UU9 113 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ALG3Q92685 438 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ACDQ96AP0 544 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SPATA17Q96L03 361 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 LRGUKQ96M69 825 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 QKIQ96PU8 341 aaKnown RBP eCLIP5.61□□□□□ -1.516e-7■■■■□ 24.8
CHD2-227ENST00000637572 OCSTAMPQ9BR26 566 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 HERC2P3Q9BVR0 1158 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 COL25A1Q9BXS0 654 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 TRIM15Q9C019 465 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 RIC8BQ9NVN3 520 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.61□□□□□ -1.51
CHD2-227ENST00000637572 NUDT5Q9UKK9 219 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 FZD10Q9ULW2 581 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 GVINP1Q7Z2Y8 2422 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 M0QZQ0 153 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 EDIL3O43854 480 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 MAP3K6O95382 1288 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 KRT16P08779 473 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 OR56A5P0C7T3 313 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 HMOX2P30519 316 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 RPL22P35268 128 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 ELK3P41970 407 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 PTPN5P54829 565 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 CSE1LP55060 971 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 AP1S1P61966 158 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 IL10RBQ08334 325 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 DMC1Q14565 340 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 RALGPS1Q5JS13 557 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 DNAJB7Q7Z6W7 309 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 STRA8Q7Z7C7 330 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 KCNMB4Q86W47 210 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 PLD5Q8N7P1 536 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 MAB21L3Q8N8X9 362 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 PHC3Q8NDX5 983 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 CMASQ8NFW8 434 aaPredicted RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 AENQ8WTP8 325 aaKnown RBP5.6□□□□□ -1.51
CHD2-227ENST00000637572 ART4Q93070 314 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 LRRC37BQ96QE4 947 aa5.6□□□□□ -1.51
CHD2-227ENST00000637572 LMAN2LQ9H0V9 348 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms