RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CTNNBL1Q8WYA6 563 aaPredicted RBP12.97□□□□□ -0.33
CTSD-208ENST00000636843 BTN2A3PQ96KV6 586 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 KREMEN1Q96MU8 473 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 FAM129BQ96TA1 746 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 SLC4A5Q9BY07 1137 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 TJP2Q9UDY2 1190 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 FTSJ1Q9UET6 329 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 SERGEFQ9UGK8 458 aa12.97□□□□□ -0.33
CTSD-208ENST00000636843 GOLGA4Q13439 2230 aaKnown RBP12.96□□□□□ -0.33
CTSD-208ENST00000636843 ANKRD62A6NC57 917 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 TTC34A8MYJ7 566 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 C10orf142B7Z368 130 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 RNASEH2AO75792 299 aaKnown RBP12.96□□□□□ -0.33
CTSD-208ENST00000636843 ADH1BP00325 375 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 KRT5P13647 590 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 GOT1P17174 413 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 C5AR1P21730 350 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 NNMTP40261 264 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 CTSOP43234 321 aaPredicted RBP12.96□□□□□ -0.33
CTSD-208ENST00000636843 SLC12A1Q13621 1099 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 SMAD1Q15797 465 aaKnown RBP12.96□□□□□ -0.33
CTSD-208ENST00000636843 MAP9Q49MG5 647 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 ZC3H12AQ5D1E8 599 aaKnown RBP12.96□□□□□ -0.33
CTSD-208ENST00000636843 SYPL2Q5VXT5 272 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 C19orf48Q6RUI8 117 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 MMS22LQ6ZRQ5 1243 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 SND1Q7KZF4 910 aaKnown RBP eCLIP12.96□□□□□ -0.335e-34■■■■■ 32
CTSD-208ENST00000636843 SLFN11Q7Z7L1 901 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 TMEM110Q86TL2 294 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 CHSY1Q86X52 802 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 FAM71AQ8IYT1 594 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 LRRC57Q8N9N7 239 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 ADAM32Q8TC27 787 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 UBE2Q2Q8WVN8 375 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 RFFLQ8WZ73 363 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 SHC3Q92529 594 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 PBKQ96KB5 322 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 SLC6A18Q96N87 628 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 ELF4Q99607 663 aaPredicted RBP12.96□□□□□ -0.33
CTSD-208ENST00000636843 POPDC2Q9HBU9 364 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 SLC12A6Q9UHW9 1150 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 SLCO3A1Q9UIG8 710 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 CEP83Q9Y592 693 aa12.96□□□□□ -0.33
CTSD-208ENST00000636843 KNTC1P50748 2209 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 BAHCC1Q9P281 2608 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 PTPRBP23467 1997 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 TRABD2BA6NFA1 517 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 E9PAM4 449 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 YKT6O15498 198 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 TRUB2O95900 331 aaKnown RBP12.95□□□□□ -0.34
CTSD-208ENST00000636843 FTCDO95954 541 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 TACR2P21452 398 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 CD38P28907 300 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 OXCT1P55809 520 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 YWHAZP63104 245 aaKnown RBP12.95□□□□□ -0.34
CTSD-208ENST00000636843 IL9RQ01113 521 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 SULT2A1Q06520 285 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 TTC39BQ5VTQ0 682 aaPredicted RBP12.95□□□□□ -0.34
CTSD-208ENST00000636843 RAP1GAP2Q684P5 730 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 DENND1BQ6P3S1 775 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 STK40Q8N2I9 435 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 PDCD7Q8N8D1 485 aaKnown RBP12.95□□□□□ -0.34
CTSD-208ENST00000636843 ATP6V0D2Q8N8Y2 350 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 SPATA4Q8NEY3 305 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 PTPRN2Q92932 1015 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 SELENOOQ9BVL4 669 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 EBF2Q9HAK2 575 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 AASDHPPTQ9NRN7 309 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTSD-208ENST00000636843 XPO7Q9UIA9 1087 aaKnown RBP12.95□□□□□ -0.34
CTSD-208ENST00000636843 RAXQ9Y2V3 346 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 PCDHGA1Q9Y5H4 931 aa12.95□□□□□ -0.34
CTSD-208ENST00000636843 URB1O60287 2271 aaKnown RBP12.95□□□□□ -0.34
CTSD-208ENST00000636843 A0A1W2PR77 199 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 F5H5T6 163 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 SEC31AO94979 1220 aaKnown RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 IGLV3-25P01717 112 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 SLC2A3P11169 496 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 CDK4P11802 303 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 GZMAP12544 262 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 PSMD8P48556 350 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 PLK1P53350 603 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 HADHBP55084 474 aaKnown RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 VSNL1P62760 191 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 C2orf54Q08AI8 447 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 EIF4EBP2Q13542 120 aaPredicted RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 CAMK2BQ13554 666 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 ELAVL3Q14576 367 aaKnown RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 ACAP1Q15027 740 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 TCEAL1Q15170 157 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 COL28A1Q2UY09 1125 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 GLE1Q53GS7 698 aaKnown RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 PDZD3Q86UT5 571 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 TMPRSS12Q86WS5 348 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 APCDD1Q8J025 514 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms