RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 HDDC3Q8N4P3 179 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 RNF10Q8N5U6 811 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 SUMF1Q8NBK3 374 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 TMIEQ8NEW7 156 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 CADM4Q8NFZ8 388 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 FRS2Q8WU20 508 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 HMCESQ96FZ2 354 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 CELF6Q96J87 481 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 LRIG1Q96JA1 1093 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 ZNF830Q96NB3 372 aaPredicted RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 ZNF599Q96NL3 588 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 FAM129BQ96TA1 746 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 HEPHQ9BQS7 1158 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 ZNF670Q9BS34 389 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 SLC39A8Q9C0K1 460 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 PCED1AQ9H1Q7 454 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 DUSP15Q9H1R2 295 aaPredicted RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 LRRC19Q9H756 370 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 CD248Q9HCU0 757 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 FBXL12Q9NXK8 326 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 WSB2Q9NYS7 404 aaPredicted RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 HECAQ9UBI9 543 aaPredicted RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 IPO11Q9UI26 975 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 AMFRQ9UKV5 643 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 TPX2Q9ULW0 747 aaKnown RBP8.38□□□□□ -1.07
PNKP-226ENST00000636840 PCDHGA5Q9Y5G8 931 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 GON4LQ3T8J9 2241 aa8.38□□□□□ -1.07
PNKP-226ENST00000636840 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 IGHV1OR15-9A0A0B4J2B8 117 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 PRR23AA6NEV1 266 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 ZNF487B1APH4 448 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 KPNA3O00505 521 aaPredicted RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 DCLK1O15075 740 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 SMAD6O43541 496 aaKnown RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 PSTPIP1O43586 416 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 PRAMEF11O60813 436 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 LRP3O75074 770 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 IGSF6O95976 241 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 GSRP00390 522 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 KRT1P04264 644 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 GNSP15586 552 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 TCF4P15884 667 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 GLDCP23378 1020 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 PSMD8P48556 350 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 TAS2R40P59535 323 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 CREB5Q02930 508 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 ZNF33AQ06730 810 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 DPYSL3Q14195 570 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 LPAL2Q16609 132 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 MYLK3Q32MK0 819 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 ARTNQ5T4W7 220 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 PMS2CLQ68D20 193 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 TXNRD3NBQ6F5E7 133 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 TIGD7Q6NT04 549 aaPredicted RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 C11orf63Q6NUN7 778 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 Q6ZVU0 165 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 CYP4V2Q6ZWL3 525 aaPredicted RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 CYP2U1Q7Z449 544 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 FAM124AQ86V42 546 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 ALYREFQ86V81 257 aaKnown RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 RFX6Q8HWS3 928 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 TMEFF1Q8IYR6 380 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 FAM160A2Q8N612 972 aaPredicted RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 PAF1Q8N7H5 531 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 ACRBPQ8NEB7 543 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 OR2AP1Q8NGE2 309 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 TPCN2Q8NHX9 752 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 CEP76Q8TAP6 659 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 PIP4K2CQ8TBX8 421 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 FAM71BQ8TC56 605 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 TOE1Q96GM8 510 aaKnown RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 RBM41Q96IZ5 413 aaKnown RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 GDAP1L1Q96MZ0 367 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 RNF157Q96PX1 679 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 GPR174Q9BXC1 333 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 OSBPL1AQ9BXW6 950 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 SLC6A17Q9H1V8 727 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 TNKS2Q9H2K2 1166 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 PABPC3Q9H361 631 aaKnown RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 KDM4CQ9H3R0 1056 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 MTG2Q9H4K7 406 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 USP36Q9P275 1121 aaKnown RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 SUSD2Q9UGT4 822 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 IL36AQ9UHA7 158 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 FZD4Q9ULV1 537 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 NEU3Q9UQ49 428 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 FCF1Q9Y324 198 aaKnown RBP8.37□□□□□ -1.07
PNKP-226ENST00000636840 PIEZO1Q92508 2521 aa8.37□□□□□ -1.07
PNKP-226ENST00000636840 ABCA7Q8IZY2 2146 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 WDFY4Q6ZS81 3184 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3DA0A087WVF3 549 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3IA0A087WXS9 549 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3EA0A087X179 549 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3KA0A087X1G2 549 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 MACROD2A1Z1Q3 448 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 CCDC66A2RUB6 948 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3FA6NER0 549 aaPredicted RBP8.36□□□□□ -1.07
PNKP-226ENST00000636840 MEI4A8MW99 385 aa8.36□□□□□ -1.07
PNKP-226ENST00000636840 TBC1D3LB9A6J9 549 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms