RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 NECAB2Q7Z6G3 386 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 CENPLQ8N0S6 344 aaPredicted RBP14.39□□□□□ -0.11
GABRB3-219ENST00000636466 GDPD5Q8WTR4 605 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 SNRNP27Q8WVK2 155 aaKnown RBP14.39□□□□□ -0.11
GABRB3-219ENST00000636466 ZNF516Q92618 1163 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 DPF3Q92784 378 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 TMEM159Q96B96 161 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 PADI3Q9ULW8 664 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 BTRCQ9Y297 605 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 TSPAN1O60635 241 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 RPLP2P05387 115 aaKnown RBP14.39□□□□□ -0.11
GABRB3-219ENST00000636466 FNBP1LQ5T0N5 605 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 HECTD3Q5T447 861 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 TRIM48Q8IWZ4 208 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 UCMAQ8WVF2 138 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 TMEM79Q9BSE2 394 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 SPATA16Q9BXB7 569 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 ASB8Q9H765 288 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 PNPOQ9NVS9 261 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 KLQ9UEF7 1012 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 HMGXB4Q9UGU5 601 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 PCDHB9Q9Y5E1 797 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 PAGE1O75459 146 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 KRT36O76013 467 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 NTRK1P04629 796 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 CLCNKBP51801 687 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 NOMO1Q15155 1222 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 PPM1JQ5JR12 505 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 LRRC8DQ7L1W4 858 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 C10orf107Q8IVU9 208 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 ATG16L2Q8NAA4 619 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 STK32AQ8WU08 396 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 MBOAT7Q96N66 472 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 NIFKQ9BYG3 293 aaKnown RBP14.39□□□□□ -0.11
GABRB3-219ENST00000636466 MINDY3Q9H8M7 445 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 SNX15Q9NRS6 342 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 ARL15Q9NXU5 204 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 TDRKHQ9Y2W6 561 aaKnown RBP14.39□□□□□ -0.11
GABRB3-219ENST00000636466 PCDHA2Q9Y5H9 948 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 ZNF536O15090 1300 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 MYBPHLA2RUH7 354 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 FKBP6O75344 327 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 CLPTM1O96005 669 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 KRT6AP02538 564 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 KRT6BP04259 564 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 KRT6CP48668 564 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 ARL4DP49703 201 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 CACNA2D1P54289 1103 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 SEMA5AQ13591 1074 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 FAM110CQ1W6H9 321 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 SLC25A52Q3SY17 297 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 ERAP2Q6P179 960 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 GPSM1Q86YR5 675 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 CLEC4CQ8WTT0 213 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 KCTD14Q9BQ13 255 aaPredicted RBP14.38□□□□□ -0.11
GABRB3-219ENST00000636466 EMILIN2Q9BXX0 1053 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 ZDHHC6Q9H6R6 413 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 WDR55Q9H6Y2 383 aaPredicted RBP14.38□□□□□ -0.11
GABRB3-219ENST00000636466 CNGB3Q9NQW8 809 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 CHRAC1Q9NRG0 131 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 CATSPERZQ9NTU4 200 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 ZNHIT2Q9UHR6 403 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 STARD13Q9Y3M8 1113 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 SNX8Q9Y5X2 465 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 ZNF280AP59817 542 aaPredicted RBP14.38□□□□□ -0.11
GABRB3-219ENST00000636466 LRRC74BQ6ZQY2 392 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 STK32CQ86UX6 486 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 DCBLD1Q8N8Z6 715 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 SPATA22Q8NHS9 363 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 MFSD3Q96ES6 412 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 NSMCE2Q96MF7 247 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 ZYG11BQ9C0D3 744 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 IGFLR1Q9H665 355 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 LIMD1Q9UGP4 676 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 TCF4P15884 667 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 MSH3P20585 1137 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 HPCAP84074 193 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 TAF10Q12962 218 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 TRIM60Q495X7 471 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 TXNRD3NBQ6F5E7 133 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 ITIH5Q86UX2 942 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 OR6Y1Q8NGX8 325 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 B3GALT6Q96L58 329 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 CORO1BQ9BR76 489 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 LHX5Q9H2C1 402 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 SCN3BQ9NY72 215 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 KCNK4Q9NYG8 393 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 PRDM4Q9UKN5 801 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 C15orf41Q9Y2V0 281 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 KAT6AQ92794 2004 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 FSBPO95073 299 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 HOXD13P35453 343 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 BLVRAP53004 296 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 IL2P60568 153 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 PACS1Q6VY07 963 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 BNIPLQ7Z465 357 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 DHFR2Q86XF0 187 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 CCDC185Q8N715 623 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 MTMR14Q8NCE2 650 aa14.38□□□□□ -0.11
GABRB3-219ENST00000636466 SPPL2AQ8TCT8 520 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms