RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 CCDC85CA6NKD9 419 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SHISA9B4DS77 424 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 NPIPB11E5RHQ5 1161 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 C3orf84H3BNL1 204 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 H7BY64 318 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 MDM4O15151 490 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 INPPL1O15357 1258 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ULK1O75385 1050 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 GJB3O75712 270 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 IGKV1-13P0DP09 117 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 GP1BBP13224 206 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PLS3P13797 630 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SLC5A1P13866 664 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ATP2B1P20020 1258 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ACHEP22303 614 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 APEX1P27695 318 aaKnown RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CD6P30203 668 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 AMTP48728 403 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 RASSF2P50749 326 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ARSEP51690 589 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PMS2P54278 862 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PDE1AP54750 535 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 EMP2P54851 167 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ANTXR2P58335 489 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CLDN10P78369 228 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 APBA1Q02410 837 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PAX5Q02548 391 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 DUSP2Q05923 314 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CYP4F3Q08477 520 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 APOBRQ0VD83 1088 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PSG7Q13046 419 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SLC14A1Q13336 389 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 NCOA4Q13772 614 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 UBE4AQ14139 1066 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PDCD1Q15116 288 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 IRF4Q15306 451 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 KRT31Q15323 416 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 Q1RN00 199 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PREPLQ4J6C6 727 aaPredicted RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 C4orf46Q504U0 113 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 FFAR4Q5NUL3 377 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 C6orf10Q5SRN2 563 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 FAM182AQ5T1J6 154 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CCNYL2Q5T2Q4 361 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 GPR158Q5T848 1215 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 C22orf42Q6IC83 251 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 XRRA1Q6P2D8 792 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 C16orf46Q6P387 395 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 RANBP10Q6VN20 620 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF841Q6ZN19 808 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ESPNLQ6ZVH7 1005 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 Q75L30 129 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PARS2Q7L3T8 475 aaKnown RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CPEB2Q7Z5Q1 589 aaKnown RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CCDC84Q86UT8 332 aaPredicted RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 AACSQ86V21 672 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ATCAYQ86WG3 371 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 C7orf61Q8IZ16 206 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SIX5Q8N196 739 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ABHD12Q8N2K0 398 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 LARGE2Q8N3Y3 721 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 LRRC71Q8N4P6 559 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CCDC82Q8N4S0 544 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF557Q8N988 423 aaPredicted RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 GLIS1Q8NBF1 620 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF114Q8NC26 417 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PRSS33Q8NF86 280 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF461Q8TAF7 563 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 MRGPRDQ8TDS7 321 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SNX19Q92543 992 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PHKBQ93100 1093 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 GJA10Q969M2 543 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CENPTQ96BT3 561 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 MARS2Q96GW9 593 aaKnown RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CHAMP1Q96JM3 812 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SPATA32Q96LK8 384 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 MAGEB18Q96M61 343 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 FOPNLQ96NB1 174 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF583Q96ND8 569 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 UIMC1Q96RL1 719 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 DOK1Q99704 481 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ARID3AQ99856 593 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 RNF5Q99942 180 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 POLR3CQ9BUI4 534 aaPredicted RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 AMNQ9BXJ7 453 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 TPSD1Q9BZJ3 242 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 OSBPL5Q9H0X9 879 aaPredicted RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SMOC2Q9H3U7 446 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 AAMDCQ9H7C9 122 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CATSPERBQ9H7T0 1116 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 JMJD4Q9H9V9 463 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SLC6A20Q9NP91 592 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 DDX4Q9NQI0 724 aaKnown RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PAPOLBQ9NRJ5 636 aaKnown RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 TYW1Q9NV66 732 aaKnown RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 FAM86C1Q9NVL1 165 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 UCKL1Q9NWZ5 548 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 CLDND1Q9NY35 253 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 NLKQ9UBE8 527 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms