RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 KLHL8Q9P2G9 620 aaPredicted RBP15.03■□□□□ -0
CACNA1A-220ENST00000635988 SARDHQ9UL12 918 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 SLC39A10Q9ULF5 831 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 TRIM64CA6NLI5 447 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 HTRA2O43464 458 aaPredicted RBP15.03■□□□□ -0
CACNA1A-220ENST00000635988 NPHS1O60500 1241 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 GABBR2O75899 941 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 PHKA2P46019 1235 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 NDST2P52849 883 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 HMGCS2P54868 508 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 SLC12A1Q13621 1099 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 SLC44A4Q53GD3 710 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 GLRA4Q5JXX5 417 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 PPP4R4Q6NUP7 873 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 HERC6Q8IVU3 1022 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 FIBCD1Q8N539 461 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 PACRGLQ8N7B6 248 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 TNIP2Q8NFZ5 429 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 C1QTNF1Q9BXJ1 281 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 CEP41Q9BYV8 373 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 PRDM12Q9H4Q4 367 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 PICK1Q9NRD5 415 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 FAM49BQ9NUQ9 324 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 TRPC5Q9UL62 973 aaPredicted RBP15.03■□□□□ -0
CACNA1A-220ENST00000635988 MGAMO43451 1857 aa15.03■□□□□ -0
CACNA1A-220ENST00000635988 TRIM24O15164 1050 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 MAGEB3O15480 346 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 TTKP33981 857 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 POU5F1BQ06416 359 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 PAFAH1B3Q15102 231 aaKnown RBP15.02■□□□□ -0
CACNA1A-220ENST00000635988 ARHGAP17Q68EM7 881 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 ZBTB49Q6ZSB9 765 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 PDZD4Q76G19 769 aaPredicted RBP15.02■□□□□ -0
CACNA1A-220ENST00000635988 LSMEM2Q8N112 164 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 MYO1HQ8N1T3 1032 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 ANKFN1Q8N957 763 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 FAM156AQ8NDB6 213 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 ADAMTS16Q8TE57 1224 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 RNF139Q8WU17 664 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 FAR2Q96K12 515 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 ZNF512Q96ME7 567 aaPredicted RBP15.02■□□□□ -0
CACNA1A-220ENST00000635988 MINDY3Q9H8M7 445 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 SPAG4Q9NPE6 437 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 BLOC1S6Q9UL45 172 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 CDH7Q9ULB5 785 aa15.02■□□□□ -0
CACNA1A-220ENST00000635988 PAIP2BQ9ULR5 123 aaKnown RBP15.02■□□□□ -0
CACNA1A-220ENST00000635988 AP3B1O00203 1094 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 CLASP2O75122 1294 aaKnown RBP15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 HSPA8P11142 646 aaKnown RBP15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 HMOX2P30519 316 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 ACADSBP45954 432 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 POLD2P49005 469 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 CBX3Q13185 183 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 SPIDRQ14159 915 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 HSDL1Q3SXM5 330 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 DCAF15Q66K64 600 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 PYROXD2Q8N2H3 581 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 AFAP1L2Q8N4X5 818 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 TERB1Q8NA31 727 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 KDM1BQ8NB78 822 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 LPGAT1Q92604 370 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF668Q96K58 619 aaPredicted RBP15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 UPF3AQ9H1J1 476 aaKnown RBP15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 SNX25Q9H3E2 840 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 RHOJQ9H4E5 214 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 LIN28AQ9H9Z2 209 aaKnown RBP15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 TBC1D23Q9NUY8 699 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 SCAF8Q9UPN6 1271 aaKnown RBP15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 RUVBL2Q9Y230 463 aaKnown RBP15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 PCDHGA4Q9Y5G9 962 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 RAD54BQ9Y620 910 aa15.02□□□□□ -0.01
CACNA1A-220ENST00000635988 KCNU1A8MYU2 1149 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 E7ENX8 843 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 CSPG5O95196 566 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 SBK3P0C264 359 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 BMP2P12643 396 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 EDNRBP24530 442 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 BST2Q10589 180 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 ITGA7Q13683 1181 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 SQLEQ14534 574 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 USP10Q14694 798 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 C16orf72Q14CZ0 275 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 SOWAHAQ2M3V2 549 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 MTX3Q5HYI7 312 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 NHSL2Q5HYW2 709 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 SAMD4BQ5PRF9 694 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 EFCAB12Q6NXP0 572 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 GPR180Q86V85 440 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 CLVS1Q8IUQ0 354 aaPredicted RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 NIM1KQ8IY84 436 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 PELI3Q8N2H9 469 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 ISOC1Q96CN7 298 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 MARK4Q96L34 752 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 PHF12Q96QT6 1004 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 HIPK3Q9H422 1215 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF277Q9NRM2 450 aaPredicted RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 NCKIPSDQ9NZQ3 722 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 TARM1B6A8C7 271 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 SDHDO14521 159 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 PTPRAP18433 802 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms